RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 SCNN1DP51172 638 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 ECM1Q16610 540 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 TMEM119Q4V9L6 283 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 HERC4Q5GLZ8 1057 aaPredicted RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 DHDDSQ86SQ9 333 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 DNAJC5GQ8N7S2 189 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 SCFD1Q8WVM8 642 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 TTC1Q99614 292 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 CDC42EP4Q9H3Q1 356 aaKnown RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 ZNF696Q9H7X3 374 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PPM1HQ9ULR3 514 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 SPAG7O75391 227 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 H2AFZP0C0S5 128 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 NR1H2P55055 460 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 CSE1LP55060 971 aaKnown RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 EIF6P56537 245 aaKnown RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 PTK7Q13308 1070 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 APOFQ13790 326 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 SPARCL1Q14515 664 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 KRT81Q14533 505 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 NR1D2Q14995 579 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 FAM91A1Q658Y4 838 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 RIPOR1Q6ZS17 1223 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 H2AFVQ71UI9 128 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 EPM2AIP1Q7L775 607 aaPredicted RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 LZTR1Q8N653 840 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 DENND1AQ8TEH3 1009 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PTCD2Q8WV60 388 aaKnown RBP10.87□□□□□ -0.67
VPS11-207ENST00000620429 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PANX3Q96QZ0 392 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 GRIP2Q9C0E4 1043 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 PADI4Q9UM07 663 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 ATAD5Q96QE3 1844 aa10.87□□□□□ -0.67
VPS11-207ENST00000620429 MYH11P35749 1972 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 CIB2O75838 187 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 FBXO21O94952 628 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 BAG2O95816 211 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 UCHL3P15374 230 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CHRNA3P32297 505 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TNNI2P48788 182 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 MARSP56192 900 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 NUP107P57740 925 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TUBA1BP68363 451 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ANKDD1AQ495B1 522 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 RWDD4Q6NW29 188 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 DCLRE1AQ6PJP8 1040 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 TUBA1AQ71U36 451 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ANO5Q75V66 913 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CYFIP1Q7L576 1253 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 VASH1Q7L8A9 365 aaPredicted RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 ADAT2Q7Z6V5 191 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 VPS36Q86VN1 386 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 AHI1Q8N157 1196 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS11-207ENST00000620429 USP6NLQ92738 828 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 GJA10Q969M2 543 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CTRCQ99895 268 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 SLC39A3Q9BRY0 314 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ERVK-5Q9HDB9 667 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 DDX4Q9NQI0 724 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 SLC38A7Q9NVC3 462 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 GID8Q9NWU2 228 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 RSL24D1Q9UHA3 163 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 HERC5Q9UII4 1024 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 HDAC9Q9UKV0 1011 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 MTUS1Q9ULD2 1270 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 SUGT1Q9Y2Z0 365 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CFAP69A5D8W1 941 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ANKRD34BA5PLL1 514 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 PEX1O43933 1283 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 USP1O94782 785 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ALAS1P13196 640 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 GSSP48637 474 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 MXI1P50539 228 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CDK9P50750 372 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 AQP4P55087 323 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 NOP14P78316 857 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 LRP8Q14114 963 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 FBXL19Q6PCT2 694 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 PPP4R1Q8TF05 950 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 CHPT1Q8WUD6 406 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 COA7Q96BR5 231 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 UIMC1Q96RL1 719 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 MRPL1Q9BYD6 325 aaKnown RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 ZNF219Q9P2Y4 722 aaPredicted RBP10.86□□□□□ -0.67
VPS11-207ENST00000620429 AMFRQ9UKV5 643 aa10.86□□□□□ -0.67
VPS11-207ENST00000620429 NAV1Q8NEY1 1877 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms