RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 CAPN8A6NHC0 703 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
RER1-209ENST00000605895 KRT1P04264 644 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 SNHG28P0DPA3 235 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 KLF1Q13351 362 aaPredicted RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 BMPR2Q13873 1038 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 HSF5Q4G112 596 aaPredicted RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 RABGAP1LQ5R372 815 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 RSPH3Q86UC2 560 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 ERLEC1Q96DZ1 483 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 HSD17B14Q9BPX1 270 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 KLHL4Q9C0H6 718 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 CD209Q9NNX6 404 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 ANKRD36CQ5JPF3 1778 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 NHSL1Q5SYE7 1610 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 SPECC1L-ADORA2AF8WAN1 911 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 ADRA2BP18089 450 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 NELFEP18615 380 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 SEPT12Q8IYM1 358 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 PPP2R3CQ969Q6 453 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 DTNBP1Q96EV8 351 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 CLMNQ96JQ2 1002 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 IQCGQ9H095 443 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 STK32BQ9NY57 414 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 MTO1Q9Y2Z2 717 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 COMMD3-BMI1R4GMX3 469 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 GRIN3BO60391 1043 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 PEX3P56589 373 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 MSLNQ13421 630 aaPredicted RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 KCNT1Q5JUK3 1230 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 DENND5BQ6ZUT9 1274 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 XXYLT1Q8NBI6 393 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 LENG1Q96BZ8 264 aaPredicted RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 TRIM56Q9BRZ2 755 aaKnown RBP16.19■□□□□ 0.18
RER1-209ENST00000605895 LXNQ9BS40 222 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 PCDHAC2Q9Y5I4 1007 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 IKBKGQ9Y6K9 419 aa16.19■□□□□ 0.18
RER1-209ENST00000605895 RREB1Q92766 1687 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 LAMB1P07942 1786 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 E2F8A0AVK6 867 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
RER1-209ENST00000605895 DNAJC6O75061 913 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 VCLP18206 1134 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 MAN1A1P33908 653 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 YWHAGP61981 247 aaKnown RBP eCLIP16.18■□□□□ 0.18
RER1-209ENST00000605895 BASP1P80723 227 aaKnown RBP16.18■□□□□ 0.18
RER1-209ENST00000605895 NFIAQ12857 509 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 CES4AQ5XG92 561 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 FBXL19Q6PCT2 694 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 OTOP1Q7RTM1 612 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ARHGAP24Q8N264 748 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ARHGAP18Q8N392 663 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 HSPBAP1Q96EW2 488 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 APOL6Q9BWW8 343 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 IVNS1ABPQ9Y6Y0 642 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 PAPPAQ13219 1627 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 LIASO43766 372 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ARP10275 920 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 DSG3P32926 999 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ZNF200P98182 395 aaPredicted RBP16.18■□□□□ 0.18
RER1-209ENST00000605895 PTK7Q13308 1070 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 PDK3Q15120 406 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 GSTA3Q16772 222 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 CLEC16AQ2KHT3 1053 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 DUS1LQ6P1R4 473 aaKnown RBP16.18■□□□□ 0.18
RER1-209ENST00000605895 TMPRSS6Q8IU80 811 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 BANPQ8N9N5 519 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 BBOF1Q8ND07 529 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 ARHGEF38Q9NXL2 777 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
RER1-209ENST00000605895 DAGLAQ9Y4D2 1042 aa16.18■□□□□ 0.18
RER1-209ENST00000605895 F8VP50 259 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 MTA2O94776 668 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 MAP3K6O95382 1288 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 PCSK6P29122 969 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 BST1Q10588 318 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 CHI3L2Q15782 390 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 GPATCH4Q5T3I0 446 aaKnown RBP16.17■□□□□ 0.18
RER1-209ENST00000605895 PADI6Q6TGC4 694 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 SYDE1Q6ZW31 735 aaPredicted RBP16.17■□□□□ 0.18
RER1-209ENST00000605895 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 SHC3Q92529 594 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 WDR83Q9BRX9 315 aaKnown RBP16.17■□□□□ 0.18
RER1-209ENST00000605895 C20orf27Q9GZN8 174 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 CYP3A7P24462 503 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 SHMT1P34896 483 aa16.17■□□□□ 0.18
RER1-209ENST00000605895 ACTR3P61158 418 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms