RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 C8orf33Q9H7E9 229 aaPredicted RBP8.02□□□□□ -1.13
HCG18-244ENST00000602516 CRLF2Q9HC73 371 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 SPON1Q9HCB6 807 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ZFYVE28Q9HCC9 887 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.02□□□□□ -1.13
HCG18-244ENST00000602516 SAGE1Q9NXZ1 904 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
HCG18-244ENST00000602516 DNAJC16Q9Y2G8 782 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 CETN3O15182 167 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ZBTB7AO95365 584 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ATP6V1G2O95670 118 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 HLA-DRAP01903 254 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 KRT18P05783 430 aaKnown RBP8.02□□□□□ -1.13
HCG18-244ENST00000602516 ABCB1P08183 1280 aaPredicted RBP8.02□□□□□ -1.13
HCG18-244ENST00000602516 AXLP30530 894 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 TSPY1Q01534 308 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ECM1Q16610 540 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 Q3ZCU0 254 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 HDXQ7Z353 690 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 KCNK18Q7Z418 384 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 GUF1Q8N442 669 aaKnown RBP8.02□□□□□ -1.13
HCG18-244ENST00000602516 BCAS4Q8TDM0 211 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 SNX29Q8TEQ0 813 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ATL1Q8WXF7 558 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 SLC47A1Q96FL8 570 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 CCDC106Q9BWC9 280 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 SHCBP1LQ9BZQ2 653 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 KCNMB3Q9NPA1 279 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.02□□□□□ -1.13
HCG18-244ENST00000602516 EMC3Q9P0I2 261 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 TSKSQ9UJT2 592 aa8.02□□□□□ -1.13
HCG18-244ENST00000602516 ABCB11O95342 1321 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 A0A0U1RQJ8 604 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 OR6C65A6NJZ3 312 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 MEIS2O14770 477 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 HPGDP15428 266 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 RPS2P15880 293 aaKnown RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 CHRNA5P30532 468 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 IDUAP35475 653 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 SEPT6Q14141 434 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 HLTFQ14527 1009 aaKnown RBP eCLIP8.01□□□□□ -1.13
HCG18-244ENST00000602516 MEA1Q16626 185 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 AOC3Q16853 763 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 FIGNQ5HY92 759 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 TTC23LQ6PF05 361 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 XKR5Q6UX68 686 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 RHOT2Q8IXI1 618 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 EXD1Q8NHP7 514 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 ABTB1Q969K4 478 aaPredicted RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 CNOT6LQ96LI5 555 aaKnown RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 CMTM3Q96MX0 182 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 ERGIC2Q96RQ1 377 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 TUBGCP5Q96RT8 1024 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 PIP5K1AQ99755 562 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 GHITMQ9H3K2 345 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 TMEM206Q9H813 350 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CTNNAL1Q9UBT7 734 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 PCDHA12Q9UN75 941 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 PCDHA1Q9Y5I3 950 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 IQANK1A0A1B0GTG1 560 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 YDJCA8MPS7 323 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 F5H6K3 240 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 IDH3BO43837 385 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 PRPF6O94906 941 aaKnown RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 GUCA1CO95843 209 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 SSBP05455 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
HCG18-244ENST00000602516 GRK2P25098 689 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 HSD17B4P51659 736 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 KLRC3Q07444 240 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 LSAMPQ13449 338 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CUL1Q13616 776 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 SF3B4Q15427 424 aaKnown RBP eCLIP8.01□□□□□ -1.13
HCG18-244ENST00000602516 OASLQ15646 514 aaKnown RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 ABCB5Q2M3G0 1257 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 FUT11Q495W5 492 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 WDR59Q6PJI9 974 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 SUPT20HQ8NEM7 779 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 IL17RDQ8NFM7 739 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 MARVELD3Q96A59 401 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 DNAJC19Q96DA6 116 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CHP1Q99653 195 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 CARD6Q9BX69 1037 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CCDC113Q9H0I3 377 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CARD9Q9H257 536 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 BRD9Q9H8M2 597 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 ACTR5Q9H9F9 607 aaPredicted RBP8.01□□□□□ -1.13
HCG18-244ENST00000602516 LZTFL1Q9NQ48 299 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 ZNF112Q9UJU3 913 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 KIF13BQ9NQT8 1826 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
HCG18-244ENST00000602516 A0A1W2PQJ5 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms