RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 ADRB2P07550 413 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PSMC3P17980 439 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 CYP3A5P20815 502 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 CCNE1P24864 410 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 DDIT3P35638 169 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 AARSP49588 968 aaKnown RBP eCLIP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 ZNF131P52739 623 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 EPHA5P54756 1037 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 GTF2BQ00403 316 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PFKPQ01813 784 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 GPR17Q13304 367 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PTPAQ15257 358 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 LPAL2Q16609 132 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 WDR44Q5JSH3 913 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 C9orf57Q5W0N0 161 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 ADALQ6DHV7 355 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 OVOS1Q6IE37 1185 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 CRELD2Q6UXH1 353 aaPredicted RBP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 GAREM2Q75VX8 874 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 CYP2U1Q7Z449 544 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 DNAJB7Q7Z6W7 309 aaPredicted RBP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 USP37Q86T82 979 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 STKLD1Q8NE28 680 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 BEST2Q8NFU1 509 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 RASSF8Q8NHQ8 419 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 AK8Q96MA6 479 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 LPIN3Q9BQK8 851 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 OSBPL6Q9BZF3 934 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 LMAN1LQ9HAT1 526 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PARVGQ9HBI0 331 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 ASAH2Q9NR71 780 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 C2orf42Q9NWW7 574 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 KCND2Q9NZV8 630 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 ODF2LQ9ULJ1 636 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 KIF3AQ9Y496 699 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PIAS3Q9Y6X2 628 aa8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 PTPRZ1P23471 2315 aaPredicted RBP8.17□□□□□ -1.1
GPATCH8-206ENST00000588554 CFAP54Q96N23 3096 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 VPS37CA5D8V6 355 aaPredicted RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 MYMKA6NI61 221 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SLC38A8A6NNN8 435 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 MEN1O00255 615 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ARNTLO00327 626 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ZNF263O14978 683 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 MICAL2O94851 1124 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 PIGRP01833 764 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ADSSP30520 456 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 LONP1P36776 959 aaKnown RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 EPHB3P54753 998 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 DMWDQ09019 674 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 GAS6Q14393 721 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 PDCD11Q14690 1871 aaKnown RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SLC39A12Q504Y0 691 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ZNF720Q7Z2F6 126 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SFR1Q86XK3 245 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ARID3BQ8IVW6 561 aaPredicted RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 ELMOD1Q8N336 334 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 KCTD17Q8N5Z5 321 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 FAM3CQ92520 227 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 LARP4BQ92615 738 aaKnown RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SAAL1Q96ER3 474 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 NELL2Q99435 816 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SEPT5Q99719 369 aaPredicted RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 PYM1Q9BRP8 204 aaKnown RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 FGFBP2Q9BYJ0 223 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SLITRK6Q9H5Y7 841 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 TMLHEQ9NVH6 421 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 CACNA1IQ9P0X4 2223 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 SPTBN4Q9H254 2564 aa8.16□□□□□ -1.1
GPATCH8-206ENST00000588554 RIF1Q5UIP0 2472 aaKnown RBP8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 CITO14578 2027 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 MYH11P35749 1972 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 A0A087X0B3 334 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 MED19A0JLT2 244 aaPredicted RBP8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 ANO9A1A5B4 782 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 GOLGA8IPA6NC78 632 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 OR6C75A6NL08 312 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 GOLGA8JA6NMD2 632 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 H0YCG3 227 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 CYB561D2O14569 222 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 HCRTO43612 131 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 KINO60870 393 aaKnown RBP8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 TBCAO75347 108 aaKnown RBP8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 PRAMEF12O95522 483 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 TDGF1P13385 188 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 ATF6P18850 670 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 TYMPP19971 482 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 GPC1P35052 558 aa8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 RPS9P46781 194 aaKnown RBP8.15□□□□□ -1.1
GPATCH8-206ENST00000588554 ALDH1A3P47895 512 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms