RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RUNX3Q13761 415 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 TMEM196Q5HYL7 178 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 C1orf228Q6PIY5 440 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 RAD54LQ92698 747 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-220ENST00000569827 SLC22A12Q96S37 553 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 TRPC7Q9HCX4 862 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 INVSQ9Y283 1065 aa13.03□□□□□ -0.32
CAPN3-220ENST00000569827 ZZEF1O43149 2961 aa13.02□□□□□ -0.32
CAPN3-220ENST00000569827 CACNA1EQ15878 2313 aa13.02□□□□□ -0.32
CAPN3-220ENST00000569827 FAM208BQ5VWN6 2430 aa13.02□□□□□ -0.32
CAPN3-220ENST00000569827 H3BQV1 296 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 EPN2O95208 641 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 FGF19O95750 216 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 F11P03951 625 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 GJB2P29033 226 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 AVPR1AP37288 418 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 UBA7P41226 1012 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 TUFMP49411 452 aaKnown RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 ZNF131P52739 623 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 KCNA1Q09470 495 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 DDR2Q16832 855 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 DYMQ7RTS9 669 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 THEM5Q8N1Q8 247 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 TBC1D7Q9P0N9 293 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 AGO2Q9UKV8 859 aaKnown RBP13.02□□□□□ -0.33
CAPN3-220ENST00000569827 SLC8A2Q9UPR5 921 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 WNT6Q9Y6F9 365 aa13.02□□□□□ -0.33
CAPN3-220ENST00000569827 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
CAPN3-220ENST00000569827 MPLP40238 635 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 RAP1GAPP47736 663 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 GALK1P51570 392 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 GTF2BQ00403 316 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 GRSF1Q12849 480 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAPN3-220ENST00000569827 PSMD2Q13200 908 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 KYAT1Q16773 422 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 STPG1Q5TH74 334 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 RPLP0P6Q8NHW5 317 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 SPPL2BQ8TCT7 592 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
CAPN3-220ENST00000569827 SAAL1Q96ER3 474 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 CYP2S1Q96SQ9 504 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 SPEGQ15772 3267 aa13.01□□□□□ -0.33
CAPN3-220ENST00000569827 PCNX2A6NKB5 2137 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 KPNA7A9QM74 516 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 ITGB3P05106 788 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 ZNF806P0C7X5 589 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 CYP2F1P24903 491 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 ADSSP30520 456 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 GJA4P35212 333 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 MTF1Q14872 753 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 SV2CQ496J9 727 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 ARL6IP4Q66PJ3 421 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 CD302Q8IX05 232 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 SYNPOQ8N3V7 929 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 PDCL2Q8N4E4 241 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 LARP4BQ92615 738 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 MRPS31Q92665 395 aaKnown RBP13□□□□□ -0.33
CAPN3-220ENST00000569827 TMX3Q96JJ7 454 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 TDP1Q9NUW8 608 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 HSFX1Q9UBD0 423 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 DSEQ9UL01 958 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 DERAQ9Y315 318 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 C2CD2Q9Y426 696 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
CAPN3-220ENST00000569827 TM4SF5O14894 197 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 GIPC1O14908 333 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 PMLP29590 882 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 WEE1P30291 646 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 HOXA6P31267 233 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 DDIT3P35638 169 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 SEC13P55735 322 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 TSPY1Q01534 308 aa12.99□□□□□ -0.33
CAPN3-220ENST00000569827 CREB5Q02930 508 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms