RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 INSRRP14616 1297 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 AXLP30530 894 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 LSP1P33241 339 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 MDH1P40925 334 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 TNFSF9P41273 254 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 GRM5P41594 1212 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 RPL21P46778 160 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 CLCN3P51790 818 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 WNT7BP56706 349 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 PPP2R2AP63151 447 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 RBP5P82980 135 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 PTPN11Q06124 597 aaPredicted RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 INCA1Q0VD86 236 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 MYO1EQ12965 1108 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 NFX1Q12986 1120 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 ZNF268Q14587 947 aaPredicted RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 TMEM132DQ14C87 1099 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 CCL15Q16663 113 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 AMHR2Q16671 573 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 DGKDQ16760 1214 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 Q3C1V9 767 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 DUSP28Q4G0W2 176 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 PPP1R15BQ5SWA1 713 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 LRRC31Q6UY01 552 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 ADAT2Q7Z6V5 191 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 DDX42Q86XP3 938 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDH13-213ENST00000569454 PASD1Q8IV76 773 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 THNSL1Q8IYQ7 743 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 RIBC1Q8N443 379 aaPredicted RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 BCAS4Q8TDM0 211 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 CENPTQ96BT3 561 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 TLCD1Q96CP7 247 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 KCTD12Q96CX2 325 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 BTBD6Q96KE9 485 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 CCDC114Q96M63 670 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 TTC25Q96NG3 672 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 SCLT1Q96NL6 688 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 CCDC77Q9BR77 488 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 DCLK3Q9C098 648 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 EPN3Q9H201 632 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 PDZD7Q9H5P4 517 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 EFCC1Q9HA90 598 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 IFT122Q9HBG6 1241 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 SLC24A3Q9HC58 644 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 SLC12A6Q9UHW9 1150 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 AKT3Q9Y243 479 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 SNX24Q9Y343 169 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 NR2E1Q9Y466 385 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 PCDHGA4Q9Y5G9 962 aa6.05□□□□□ -1.44
CDH13-213ENST00000569454 POLR2AP24928 1970 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 ANKRD11Q6UB99 2663 aaPredicted RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 ZNFX1Q9P2E3 1918 aaKnown RBP6.05□□□□□ -1.44
CDH13-213ENST00000569454 A0A1B0GUA9 196 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 TCRBV5S1A1TA0A578 114 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 SIGLEC16A6NMB1 481 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 H3BRB1 525 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 RGS16O15492 202 aaPredicted RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 RIPK2O43353 540 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 CILPO75339 1184 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 ZNF189O75820 626 aaPredicted RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 RNF8O76064 485 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 KIAA0754O94854 1291 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 RPLP2P05387 115 aaKnown RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 ITGAVP06756 1048 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 MMP3P08254 477 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 KRT19P08727 400 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 CXCL8P10145 99 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 RALAP11233 206 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 CD19P15391 556 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 ATF7P17544 494 aaPredicted RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 CD58P19256 250 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 PCK1P35558 622 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 SSR1P43307 286 aaKnown RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 GABRB2P47870 512 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 YARSP54577 528 aaKnown RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 NR1H3Q13133 447 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 PDCLQ13371 301 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 TRADDQ15628 312 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 GRIK4Q16099 956 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 CNGA2Q16280 664 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 PTGISQ16647 500 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 WDR72Q3MJ13 1102 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 EAPPQ56P03 285 aaPredicted RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 TFDP3Q5H9I0 405 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 EEF1DP3Q658K8 133 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 KCTD16Q68DU8 428 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 RHBDF2Q6PJF5 856 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 MTHFD1LQ6UB35 978 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 PLEKHH3Q7Z736 793 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 YTHDF3Q7Z739 585 aaKnown RBP6.04□□□□□ -1.44
CDH13-213ENST00000569454 PCGF5Q86SE9 256 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 DPP9Q86TI2 863 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 ZDHHC17Q8IUH5 632 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 SH2D3CQ8N5H7 860 aa6.04□□□□□ -1.44
CDH13-213ENST00000569454 LRRC52Q8N7C0 313 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms