RNA–Protein interactions for RNA: ENST00000563525.2

USP31-202, Transcript of ubiquitin specific peptidase 31, humanhuman

TSL 5

Gene USP31, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-202ENST00000563525 INCA1Q0VD86 236 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 CETN1Q12798 172 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 CUL2Q13617 745 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 MDH1BQ5I0G3 518 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 PPM1LQ5SGD2 360 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
USP31-202ENST00000563525 LUZP1Q86V48 1076 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 ARHGEF19Q8IW93 802 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 DCP1BQ8IZD4 617 aaKnown RBP13.07□□□□□ -0.32
USP31-202ENST00000563525 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 VPS16Q9H269 839 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 CYP3A43Q9HB55 503 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 USP15Q9Y4E8 981 aaPredicted RBP13.07□□□□□ -0.32
USP31-202ENST00000563525 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
USP31-202ENST00000563525 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
USP31-202ENST00000563525 CILPO75339 1184 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 IL9P15248 144 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 PTPN1P18031 435 aaKnown RBP13.06□□□□□ -0.32
USP31-202ENST00000563525 SMAD4Q13485 552 aaKnown RBP13.06□□□□□ -0.32
USP31-202ENST00000563525 EXOC3L4Q17RC7 722 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 ZNF394Q53GI3 561 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 PTCRAQ6ISU1 281 aaPredicted RBP13.06□□□□□ -0.32
USP31-202ENST00000563525 PHLDB3Q6NSJ2 640 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 ACOT1Q86TX2 421 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP31-202ENST00000563525 PPM1KQ8N3J5 372 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 PCED1BQ96HM7 432 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 ADAM7Q9H2U9 754 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 ZDHHC7Q9NXF8 308 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 DPP7Q9UHL4 492 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 YIPF1Q9Y548 306 aa13.06□□□□□ -0.32
USP31-202ENST00000563525 PAPLNO95428 1278 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 PON1P27169 355 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 GPR15P49685 360 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 COPB1P53618 953 aaKnown RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 MRPS5P82675 430 aaKnown RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 ITIH3Q06033 890 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 KCNMA1Q12791 1236 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 TWF1Q12792 350 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 ELMSAN1Q6PJG2 1045 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 LRSAM1Q6UWE0 723 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 CCDC149Q6ZUS6 474 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 UBR7Q8N806 425 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 CMASQ8NFW8 434 aaPredicted RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 MYCBPAPQ8TBZ2 947 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 ATXN2LQ8WWM7 1075 aaKnown RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 SUSD6Q92537 303 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 FAXDC2Q96IV6 333 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 PRKD2Q9BZL6 878 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 LIMA1Q9UHB6 759 aaKnown RBP13.05□□□□□ -0.32
USP31-202ENST00000563525 PCDHB5Q9Y5E4 795 aa13.05□□□□□ -0.32
USP31-202ENST00000563525 C2orf16Q68DN1 1984 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 BECN2A8MW95 431 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 CLDN5O00501 218 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 ATF6P18850 670 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 CYP2F1P24903 491 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 HOXA9P31269 272 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 NTHL1P78549 312 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 CYP27A1Q02318 531 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 NFE2Q16621 373 aaPredicted RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 DPY19L2P1Q6NXN4 242 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 UNC93AQ86WB7 457 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 SPATA2LQ8IUW3 424 aaPredicted RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 C12orf29Q8N999 325 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 STKLD1Q8NE28 680 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 FAM200AQ8TCP9 573 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 SPPL2BQ8TCT7 592 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 KREMEN1Q96MU8 473 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 ASB2Q96Q27 587 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 POMKQ9H5K3 350 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 HCFC1R1Q9NWW0 138 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 CEP72Q9P209 647 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 AJAP1Q9UKB5 411 aaPredicted RBP13.04□□□□□ -0.32
USP31-202ENST00000563525 DOCK6Q96HP0 2047 aa13.04□□□□□ -0.32
USP31-202ENST00000563525 LRG1P02750 347 aa13.03□□□□□ -0.32
USP31-202ENST00000563525 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP31-202ENST00000563525 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
USP31-202ENST00000563525 CCDC130P13994 396 aa13.03□□□□□ -0.32
USP31-202ENST00000563525 ACO1P21399 889 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms