RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 NEU2Q9Y3R4 380 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PDCD11Q14690 1871 aaKnown RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 SHBGP04278 402 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 ERBB2P04626 1255 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 KRT3P12035 628 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 ATF2P15336 505 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 PSMA2P25787 234 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 HOXA11P31270 313 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 RFC1P35251 1148 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 TMEM62Q0P6H9 643 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 MFSD7Q6UXD7 560 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 TTC39CQ8N584 583 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 JOSD2Q8TAC2 188 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 FNIP1Q8TF40 1166 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 RRAGCQ9HB90 399 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 BARX2Q9UMQ3 279 aaPredicted RBP10.36□□□□□ -0.75
SMG1-205ENST00000561947 DERAQ9Y315 318 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 NRCAMQ92823 1304 aa10.36□□□□□ -0.75
SMG1-205ENST00000561947 SCN1AP35498 2009 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 M0QYV0 167 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 GPR32O75388 356 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TJP3O95049 919 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 HMGCRP04035 888 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 KRT10P13645 584 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ATF7P17544 494 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 HPDP32754 393 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 CAV1Q03135 178 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ADCY2Q08462 1091 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 SLC29A2Q14542 456 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ZNF268Q14587 947 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 TRIP13Q15645 432 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 CNGA2Q16280 664 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TXNRD3NBQ6F5E7 133 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 SLC27A1Q6PCB7 646 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 POLNQ7Z5Q5 900 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 KAT2BQ92831 832 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 HEXIM2Q96MH2 286 aaKnown RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 FAM118BQ9BPY3 351 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 SYNCQ9H7C4 482 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 PLEKHA5Q9HAU0 1116 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 NOVA2Q9UNW9 492 aaKnown RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 SRCAPQ6ZRS2 3230 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 hCG_1818297A0A087WSY0 165 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 SMIM35A0A1B0GVV1 85 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 RIPK2O43353 540 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 MDH1P40925 334 aaKnown RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 GABRB2P47870 512 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 NDST1P52848 882 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ITGA8P53708 1063 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ODF2Q5BJF6 829 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 KAZNQ674X7 775 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 OLFML2BQ68BL8 750 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 DRICH1Q6PGQ1 229 aaPredicted RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 FOXR1Q6PIV2 292 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 ZNF365Q70YC5 407 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TRMT10CQ7L0Y3 403 aaKnown RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 TLK2Q86UE8 772 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 RAPGEF5Q92565 580 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TLCD1Q96CP7 247 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 SNX27Q96L92 541 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 METTL5Q9NRN9 209 aaKnown RBP10.35□□□□□ -0.75
SMG1-205ENST00000561947 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 FLRT1Q9NZU1 646 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 GINS2Q9Y248 185 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 TRPM7Q96QT4 1865 aa10.35□□□□□ -0.75
SMG1-205ENST00000561947 LIASO43766 372 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 ZNF865P0CJ78 1059 aaPredicted RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 CYP2C9P11712 490 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 ADCY8P40145 1251 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 GPD2P43304 727 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 GUCY1A3Q02108 690 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 SLC25A11Q02978 314 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 LMNB2Q03252 620 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 MYO1EQ12965 1108 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 MFSD10Q14728 455 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 PCBP1Q15365 356 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMG1-205ENST00000561947 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 UBAP2Q5T6F2 1119 aaKnown RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 NOTUMQ6P988 496 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CROCCP2Q86T23 111 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CCDC25Q86WR0 208 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CCDC89Q8N998 374 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 BBOF1Q8ND07 529 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 MCRS1Q96EZ8 462 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 OSMRQ99650 979 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 TMEM109Q9BVC6 243 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 TSPYL1Q9H0U9 437 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 CDHR5Q9HBB8 845 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 KIAA1257Q9ULG3 409 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 LRRD1A4D1F6 860 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 IGF2BP3O00425 579 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMG1-205ENST00000561947 CAND2O75155 1236 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 LRCH4O75427 683 aa10.34□□□□□ -0.75
SMG1-205ENST00000561947 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
SMG1-205ENST00000561947 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms