RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 AGBL2Q5U5Z8 902 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 C17orf99Q6UX52 265 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 RCOR2Q8IZ40 523 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 FNIP1Q8TF40 1166 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 HPDLQ96IR7 371 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
DCAF11-227ENST00000560046 PPP1R16BQ96T49 567 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 SMYD3Q9H7B4 428 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 WHRNQ9P202 907 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 AGAP1Q9UPQ3 857 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 SNX24Q9Y343 169 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
DCAF11-227ENST00000560046 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 O00370 1275 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 NPTXRO95502 500 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 HMGCRP04035 888 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 NUDT17P0C025 328 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CD19P15391 556 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 ACTN2P35609 894 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CETN2P41208 172 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 KCNJ1P48048 391 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CDH8P55286 799 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 EIF3BP55884 814 aaKnown RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 OGDHQ02218 1023 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 MFSD10Q14728 455 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 TAF1CQ15572 869 aaPredicted RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 SLC27A1Q6PCB7 646 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 POLNQ7Z5Q5 900 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 TLK2Q86UE8 772 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 ATL2Q8NHH9 583 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 FBXO25Q8TCJ0 367 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CD99L2Q8TCZ2 262 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 C1orf54Q8WWF1 131 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 FAM122AQ96E09 287 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 TMEM176AQ96HP8 235 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 SNX27Q96L92 541 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 ATP6V1G3Q96LB4 118 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 TWNKQ96RR1 684 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 TSPAN18Q96SJ8 248 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 OSBPL8Q9BZF1 889 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 MTMR10Q9NXD2 777 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 DDX56Q9NY93 547 aaKnown RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 FLRT1Q9NZU1 646 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 MTRF1LQ9UGC7 380 aaKnown RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 CYTH4Q9UIA0 394 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 PRDM4Q9UKN5 801 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 BARX2Q9UMQ3 279 aaPredicted RBP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
DCAF11-227ENST00000560046 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
DCAF11-227ENST00000560046 MICAL2O94851 1124 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 KRT14P02533 472 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 RALAP11233 206 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 CYP2C9P11712 490 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 IVDP26440 423 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 HOXC8P31273 242 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 PLTPP55058 493 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 ZNF844Q08AG5 666 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 NFX1Q12986 1120 aaKnown RBP11.22□□□□□ -0.61
DCAF11-227ENST00000560046 STILQ15468 1287 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 PRAMEF19Q5SWL8 479 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 CEP85LQ5SZL2 805 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 DRICH1Q6PGQ1 229 aaPredicted RBP11.22□□□□□ -0.61
DCAF11-227ENST00000560046 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 RHBDF2Q6PJF5 856 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 Q7L0L9 218 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 XYLT1Q86Y38 959 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 TMEM130Q8N3G9 435 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 UBLCP1Q8WVY7 318 aaPredicted RBP11.22□□□□□ -0.61
DCAF11-227ENST00000560046 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 SLITRK1Q96PX8 696 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 HTATIP2Q9BUP3 242 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 TMEM109Q9BVC6 243 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 GJD2Q9UKL4 321 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 USTQ9Y2C2 406 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 EFR3BQ9Y2G0 817 aa11.22□□□□□ -0.61
DCAF11-227ENST00000560046 R3HDM2Q9Y2K5 976 aaKnown RBP11.22□□□□□ -0.61
DCAF11-227ENST00000560046 F8VP50 259 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms