RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 HMGCRP04035 888 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TXNP10599 105 aaKnown RBP8.78□□□□□ -1
SPG11-209ENST00000558253 VDRP11473 427 aa8.78□□□□□ -1
SPG11-209ENST00000558253 IVDP26440 423 aa8.78□□□□□ -1
SPG11-209ENST00000558253 GCLCP48506 637 aaPredicted RBP8.78□□□□□ -1
SPG11-209ENST00000558253 GTF2A1P52655 376 aaPredicted RBP8.78□□□□□ -1
SPG11-209ENST00000558253 SLC18A1P54219 525 aa8.78□□□□□ -1
SPG11-209ENST00000558253 MYL6P60660 151 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TFAMQ00059 246 aaKnown RBP8.78□□□□□ -1
SPG11-209ENST00000558253 FSTL1Q12841 308 aa8.78□□□□□ -1
SPG11-209ENST00000558253 MORF4L2Q15014 288 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
SPG11-209ENST00000558253 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
SPG11-209ENST00000558253 TFDP3Q5H9I0 405 aa8.78□□□□□ -1
SPG11-209ENST00000558253 SPOPLQ6IQ16 392 aa8.78□□□□□ -1
SPG11-209ENST00000558253 EFCAB12Q6NXP0 572 aa8.78□□□□□ -1
SPG11-209ENST00000558253 AADACL2Q6P093 401 aa8.78□□□□□ -1
SPG11-209ENST00000558253 GSTA5Q7RTV2 222 aa8.78□□□□□ -1
SPG11-209ENST00000558253 ANKS1BQ7Z6G8 1248 aa8.78□□□□□ -1
SPG11-209ENST00000558253 CPLX4Q7Z7G2 160 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TADA2BQ86TJ2 420 aa8.78□□□□□ -1
SPG11-209ENST00000558253 VSIG1Q86XK7 387 aa8.78□□□□□ -1
SPG11-209ENST00000558253 RHPN2Q8IUC4 686 aa8.78□□□□□ -1
SPG11-209ENST00000558253 CACNA2D3Q8IZS8 1091 aa8.78□□□□□ -1
SPG11-209ENST00000558253 GPRC5AQ8NFJ5 357 aa8.78□□□□□ -1
SPG11-209ENST00000558253 OR2W6PQ8NHA6 318 aa8.78□□□□□ -1
SPG11-209ENST00000558253 PPTC7Q8NI37 304 aa8.78□□□□□ -1
SPG11-209ENST00000558253 C1orf54Q8WWF1 131 aa8.78□□□□□ -1
SPG11-209ENST00000558253 RAPGEF5Q92565 580 aa8.78□□□□□ -1
SPG11-209ENST00000558253 CCDC114Q96M63 670 aa8.78□□□□□ -1
SPG11-209ENST00000558253 CFAP57Q96MR6 1250 aa8.78□□□□□ -1
SPG11-209ENST00000558253 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
SPG11-209ENST00000558253 XYLT2Q9H1B5 865 aa8.78□□□□□ -1
SPG11-209ENST00000558253 SEMA4AQ9H3S1 761 aa8.78□□□□□ -1
SPG11-209ENST00000558253 ELP3Q9H9T3 547 aa8.78□□□□□ -1
SPG11-209ENST00000558253 PLEKHA5Q9HAU0 1116 aa8.78□□□□□ -1
SPG11-209ENST00000558253 UBN1Q9NPG3 1134 aa8.78□□□□□ -1
SPG11-209ENST00000558253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -1
SPG11-209ENST00000558253 SENP1Q9P0U3 644 aa8.78□□□□□ -1
SPG11-209ENST00000558253 FETUBQ9UGM5 382 aa8.78□□□□□ -1
SPG11-209ENST00000558253 LGALS13Q9UHV8 139 aa8.78□□□□□ -1
SPG11-209ENST00000558253 ITGA11Q9UKX5 1188 aa8.78□□□□□ -1
SPG11-209ENST00000558253 PTPN22Q9Y2R2 807 aa8.78□□□□□ -1
SPG11-209ENST00000558253 C2CD2Q9Y426 696 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TELO2Q9Y4R8 837 aa8.78□□□□□ -1
SPG11-209ENST00000558253 GOLGA6L7A0A1B0GV03 622 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 TCRBV7S2A1N4TA0A589 114 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 INO80B-WBP1J3KQ70 363 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 CDH16O75309 829 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ZNF189O75820 626 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 FSBPO95073 299 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 C22orf31O95567 290 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 CST3P01034 146 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 GHRP10912 638 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 KRT3P12035 628 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 PCK1P35558 622 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 SSR1P43307 286 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 ASPAP45381 313 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 GABRB2P47870 512 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 KCNJ1P48048 391 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ITGA8P53708 1063 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 WNT7BP56706 349 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 RBP5P82980 135 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 MBTD1Q05BQ5 628 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 CBLBQ13191 982 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ITIH4Q14624 930 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 R3HDM1Q15032 1099 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 CNGA2Q16280 664 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 TAZQ16635 292 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 HSDL1Q3SXM5 330 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ZBTB41Q5SVQ8 909 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 LMBRD2Q68DH5 695 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 GPAT2Q6NUI2 795 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 HIBCHQ6NVY1 386 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 FOXR1Q6PIV2 292 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 C4orf22Q6V702 233 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 PPP1R21Q6ZMI0 780 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 SPOCD1Q6ZMY3 1216 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ZBTB33Q86T24 672 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ZNF410Q86VK4 478 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 TDRPQ86YL5 185 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 FBXO41Q8TF61 875 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 CDCA5Q96FF9 252 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 CABS1Q96KC9 395 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 SLITRK1Q96PX8 696 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 ADPGKQ9BRR6 497 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 FRMD8Q9BZ67 464 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 INO80BQ9C086 356 aaPredicted RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 PRDM16Q9HAZ2 1276 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 PCDH9Q9HC56 1237 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 PPANQ9NQ55 473 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 INTS9Q9NV88 658 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 TPX2Q9ULW0 747 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 SHOC2Q9UQ13 582 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 KIAA1217Q5T5P2 1943 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 MYH9P35579 1960 aaKnown RBP8.77□□□□□ -1.01
SPG11-209ENST00000558253 WDR90Q96KV7 1748 aa8.77□□□□□ -1.01
SPG11-209ENST00000558253 DICER1Q9UPY3 1922 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms