RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 YIPF1Q9Y548 306 aa22.33■■□□□ 1.17
SEC23A-213ENST00000557280 CCDC195A0A1B0GUA6 201 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 PES1O00541 588 aaKnown RBP22.32■■□□□ 1.16
SEC23A-213ENST00000557280 CCL16O15467 120 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 MBTPS2O43462 519 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 CILPO75339 1184 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 COPB1P53618 953 aaKnown RBP22.32■■□□□ 1.16
SEC23A-213ENST00000557280 CETN1Q12798 172 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 SMAD4Q13485 552 aaKnown RBP22.32■■□□□ 1.16
SEC23A-213ENST00000557280 PPM1LQ5SGD2 360 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 PHLDB3Q6NSJ2 640 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 GJB7Q6PEY0 223 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 TRIM65Q6PJ69 517 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 LRSAM1Q6UWE0 723 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 GBP6Q6ZN66 633 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 RRAGAQ7L523 313 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 UBR7Q8N806 425 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 ELOVL4Q9GZR5 314 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 ADAM7Q9H2U9 754 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 CISHQ9NSE2 258 aa22.32■■□□□ 1.16
SEC23A-213ENST00000557280 C2orf16Q68DN1 1984 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 GTPBP10A4D1E9 387 aaKnown RBP22.31■■□□□ 1.16
SEC23A-213ENST00000557280 SMTNL1A8MU46 457 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 PAPLNO95428 1278 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 PTPN1P18031 435 aaKnown RBP22.31■■□□□ 1.16
SEC23A-213ENST00000557280 PON1P27169 355 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 ELF1P32519 619 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 GPR15P49685 360 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 CCDC149Q6ZUS6 474 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 ACOT1Q86TX2 421 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 PPM1KQ8N3J5 372 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 B3GALNT2Q8NCR0 500 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 CMASQ8NFW8 434 aaPredicted RBP22.31■■□□□ 1.16
SEC23A-213ENST00000557280 SUSD6Q92537 303 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 PCED1BQ96HM7 432 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 SEPT5Q99719 369 aaPredicted RBP22.31■■□□□ 1.16
SEC23A-213ENST00000557280 SIX2Q9NPC8 291 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 ZDHHC7Q9NXF8 308 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 DPP7Q9UHL4 492 aa22.31■■□□□ 1.16
SEC23A-213ENST00000557280 AJAP1Q9UKB5 411 aaPredicted RBP22.31■■□□□ 1.16
SEC23A-213ENST00000557280 IL9P15248 144 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 KCNMA1Q12791 1236 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 TWF1Q12792 350 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 EXOC3L4Q17RC7 722 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 ZNF394Q53GI3 561 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 PTCRAQ6ISU1 281 aaPredicted RBP22.3■■□□□ 1.16
SEC23A-213ENST00000557280 DPY19L2P1Q6NXN4 242 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 GPR149Q86SP6 731 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.3■■□□□ 1.16
SEC23A-213ENST00000557280 MYCBPAPQ8TBZ2 947 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 FAXDC2Q96IV6 333 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 KREMEN1Q96MU8 473 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 PRKD2Q9BZL6 878 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 TSPY26PQ9H489 355 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 PCDHB5Q9Y5E4 795 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 UNC80Q8N2C7 3258 aa22.3■■□□□ 1.16
SEC23A-213ENST00000557280 BECN2A8MW95 431 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 CLDN5O00501 218 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 ATF6P18850 670 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 CDK11BP21127 795 aaKnown RBP22.29■■□□□ 1.16
SEC23A-213ENST00000557280 ACO1P21399 889 aaKnown RBP22.29■■□□□ 1.16
SEC23A-213ENST00000557280 CYP2F1P24903 491 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 HOXA9P31269 272 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 ITIH3Q06033 890 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 NFE2Q16621 373 aaPredicted RBP22.29■■□□□ 1.16
SEC23A-213ENST00000557280 UVSSAQ2YD98 709 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 MGAT5BQ3V5L5 792 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 UNC93AQ86WB7 457 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 C12orf29Q8N999 325 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 STKLD1Q8NE28 680 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 FAM200AQ8TCP9 573 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 SPPL2BQ8TCT7 592 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 ATXN2LQ8WWM7 1075 aaKnown RBP22.29■■□□□ 1.16
SEC23A-213ENST00000557280 SMG7Q92540 1137 aaKnown RBP22.29■■□□□ 1.16
SEC23A-213ENST00000557280 B3GNT5Q9BYG0 378 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 TMEM30AQ9NV96 361 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 HCFC1R1Q9NWW0 138 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 MAFFQ9ULX9 164 aa22.29■■□□□ 1.16
SEC23A-213ENST00000557280 HNRNPA1P09651 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 HAPLN1P10915 354 aaPredicted RBP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 CCDC130P13994 396 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 TBXAS1P24557 533 aaPredicted RBP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 KLK7P49862 253 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 CACNA2D1P54289 1103 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 RAD23BP54727 409 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 ZNF445P59923 1031 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 NTHL1P78549 312 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 MRPS5P82675 430 aaKnown RBP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 CYP27A1Q02318 531 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 SDHAF4Q5VUM1 108 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 SPATA2LQ8IUW3 424 aaPredicted RBP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 CRYBG2Q8N1P7 616 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 C2orf15Q8WU43 125 aaKnown RBP22.28■■□□□ 1.16
SEC23A-213ENST00000557280 ASB2Q96Q27 587 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 NT5C1AQ9BXI3 368 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 ZNF518BQ9C0D4 1074 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 POMKQ9H5K3 350 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 FAM49BQ9NUQ9 324 aa22.28■■□□□ 1.16
SEC23A-213ENST00000557280 CEP72Q9P209 647 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms