RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ORC2Q13416 577 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CUL4BQ13620 913 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 KCNB1Q14721 858 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MTF1Q14872 753 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 PTPN21Q16825 1174 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MUM1L1Q5H9M0 696 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC122Q5T0U0 273 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC181Q5TID7 509 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 VASNQ6EMK4 673 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 RGMBQ6NW40 437 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CNNM4Q6P4Q7 775 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 RAD9BQ6WBX8 426 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 OTOP3Q7RTS5 596 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 HEATR3Q7Z4Q2 680 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 KBTBD2Q8IY47 623 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC170Q8IYT3 715 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 SYNE4Q8N205 404 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MSL3Q8N5Y2 521 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 DTX3Q8N9I9 347 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CNBD1Q8NA66 436 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MSANTD4Q8NCY6 345 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ACRBPQ8NEB7 543 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 NEK11Q8NG66 645 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 UHMK1Q8TAS1 419 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 RUBCNQ92622 972 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CALML4Q96GE6 196 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MASTLQ96GX5 879 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 AJUBAQ96IF1 538 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 AK8Q96MA6 479 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 TSG101Q99816 390 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 RHOXF2Q9BQY4 288 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 LRRC27Q9C0I9 530 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 BLZF1Q9H2G9 400 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CD248Q9HCU0 757 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 INCENPQ9NQS7 918 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ST7Q9NRC1 585 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 PSD3Q9NYI0 1048 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 FBXL7Q9UJT9 491 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 LUC7L2Q9Y383 392 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 BAZ2AQ9UIF9 1905 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 UNC80Q8N2C7 3258 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 COL1A1P02452 1464 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ROBO3Q96MS0 1386 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 hCG_1642624A0A1W2PR95 340 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ANO9A1A5B4 782 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 H0YGN5 161 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 UBE2Q2LH0YL09 131 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 hCG_1984214I3L0E3 225 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 TEX33O43247 280 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SUV39H1O43463 412 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 TACC1O75410 805 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 CAMTA2O94983 1202 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 NDUFA10O95299 355 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 GJB6O95452 261 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 LDHCP07864 332 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 OR52Z1P0C646 297 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 TSPY3P0CV98 308 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 TSPY8P0CW00 308 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 COL6A1P12109 1028 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 LCP1P13796 627 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 FAHP16930 419 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 CAPN2P17655 700 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 GNA11P29992 359 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PBX1P40424 430 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PRPHP41219 470 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PAFAH1B1P43034 410 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 NAPAP54920 295 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 DYNLL1P63167 89 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ASIC1P78348 528 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ST5P78524 1137 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 GRM4Q14833 912 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 NONOQ15233 471 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SF1Q15637 639 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SMAD2Q15796 467 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PRSS53Q2L4Q9 553 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC96Q2M329 555 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SBK1Q52WX2 424 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 TBC1D9BQ66K14 1250 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PROSER1Q86XN7 944 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 DGKHQ86XP1 1220 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 FOXP4Q8IVH2 680 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ZNF444Q8N0Y2 327 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 CSGALNACT2Q8N6G5 542 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ZNF713Q8N859 430 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 MB21D1Q8N884 522 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 OR8K1Q8NGG5 319 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 AFAP1L1Q8TED9 768 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 JDP2Q8WYK2 163 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 ZCCHC14Q8WYQ9 949 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SECISBP2LQ93073 1101 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 P2RX5Q93086 422 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 DHTKD1Q96HY7 919 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
ATXN3-241ENST00000556374 RIOK1Q9BRS2 568 aaKnown RBP4.82□□□□□ -1.64
ATXN3-241ENST00000556374 VIPAS39Q9H9C1 493 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms