RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 LOC110117498-PIK3R3F6TDL0 507 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SULT1B1O43704 296 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CIAO1O76071 339 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 RHOBTB3O94955 611 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 FGAP02671 866 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ABHD2P08910 425 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PIK3R1P27986 724 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SLC26A3P40879 764 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SARSP49591 514 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 HERVK_113P62684 666 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 HERC3Q15034 1050 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ZNF829Q3KNS6 432 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CLHC1Q8NHS4 586 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 EPS8L3Q8TE67 593 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PIK3R3Q92569 461 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PACSIN1Q9BY11 444 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 OR2B2Q9GZK3 357 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 DHX36Q9H2U1 1008 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ZNF556Q9HAH1 456 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PLCL2Q9UPR0 1127 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 RTCBQ9Y3I0 505 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 NPATQ14207 1427 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PLB1Q6P1J6 1458 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 LDHBP07195 334 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 RALBP11234 206 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ATF6P18850 670 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 MSH3P20585 1137 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ME2P23368 584 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 HOXD12P35452 270 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CYP2J2P51589 502 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 RTP1P59025 263 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 KNOP1Q1ED39 458 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ATG14Q6ZNE5 492 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CCNJLQ8IV13 435 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 KCNB2Q92953 911 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 XAGE2Q96GT9 111 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 FAIMQ9NVQ4 179 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PDPK1O15530 556 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CCND2P30279 289 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 GTF2H1P32780 548 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TALDO1P37837 337 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 GSSP48637 474 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CCNG1P51959 295 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 YARSP54577 528 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 FMR1Q06787 632 aaKnown RBP eCLIP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 EIF4A2Q14240 407 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PUM3Q15397 648 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CCDC85BQ15834 202 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 NAALADL2Q58DX5 795 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TMEM109Q9BVC6 243 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 NUP85Q9BW27 656 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 MND1Q9BWT6 205 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 COPRSQ9NQ92 184 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CNOT8Q9UFF9 292 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ERVK-11Q9UQG0 969 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 MROH7-TTC4A0A0A0MT08 1334 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SAMD9LQ8IVG5 1584 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ILVBLA1L0T0 632 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 HTR3EA5X5Y0 456 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ANKRD33BA6NCL7 494 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 BTNL10A8MVZ5 291 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PSMD3O43242 534 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ZBED4O75132 1171 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TRIP4Q15650 581 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CHI3L2Q15782 390 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TTC23Q5W5X9 447 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TPTE2Q6XPS3 522 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 G2E3Q7L622 706 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 LEMD2Q8NC56 503 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 TTC8Q8TAM2 541 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 MKL1Q969V6 931 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 VPS33AQ96AX1 596 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CINPQ9BW66 212 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PRG3Q9Y2Y8 225 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 MRPL11Q9Y3B7 192 aaKnown RBP9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 PCDHB6Q9Y5E3 794 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SNX13Q9Y5W8 968 aa9.13□□□□□ -0.95
PPFIA2-220ENST00000550584 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 YES1P07947 543 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 KRT19P08727 400 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 RARAP10276 462 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 ATXN3P54252 364 aaPredicted RBP9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 TTC23LQ6PF05 361 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 KIAA0408Q6ZU52 694 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 C12orf56Q8IXR9 622 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 FAM13CQ8NE31 585 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 FNDC8Q8TC99 324 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 KIAA1683Q9H0B3 1180 aa9.12□□□□□ -0.95
PPFIA2-220ENST00000550584 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms