RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 DPP7Q9UHL4 492 aa7.67□□□□□ -1.18
DEPDC4-208ENST00000549341 ZMIZ1Q9ULJ6 1067 aa7.67□□□□□ -1.18
DEPDC4-208ENST00000549341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.67□□□□□ -1.18
DEPDC4-208ENST00000549341 CACNA1IQ9P0X4 2223 aa7.67□□□□□ -1.18
DEPDC4-208ENST00000549341 ITPR1Q14643 2758 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 DENND4AQ7Z401 1863 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 IGKV6D-21A0A0A0MT36 114 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 C1QTNF9BB2RNN3 333 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 TULP1O00294 542 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 KIAA0391O15091 583 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 POMCP01189 267 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NR3C1P04150 777 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 SOD2P04179 222 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 PROS1P07225 676 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 RETP07949 1114 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 C1QTNF9P0C862 333 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 SKILP12757 684 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 TRIM21P19474 475 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 ATP4AP20648 1035 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 CTHP32929 405 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 MAGEA9P43362 315 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 AFF1P51825 1210 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NCKAP1LP55160 1127 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 PEX3P56589 373 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 PFKPQ01813 784 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 CETN1Q12798 172 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 STRN3Q13033 797 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 SRSF5Q13243 272 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 UGCGQ16739 394 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 ZCWPW2Q504Y3 356 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 CEP135Q66GS9 1140 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 PLA2G4FQ68DD2 849 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 UNQ6494/PRO21346Q6UXR6 183 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 ANO5Q75V66 913 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 MTSS1LQ765P7 747 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 TAS1R1Q7RTX1 841 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 GRASPQ7Z6J2 395 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 FMNL3Q8IVF7 1028 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 ZC3H3Q8IXZ2 948 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 MEIOBQ8N635 442 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 DEPTORQ8TB45 409 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 DDX1Q92499 740 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 PANX2Q96RD6 677 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 DDX23Q9BUQ8 820 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NUCKS1Q9H1E3 243 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NDST4Q9H3R1 872 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 FAM105AQ9NUU6 356 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 MARCH5Q9NX47 278 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 STK39Q9UEW8 545 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 DNMT3LQ9UJW3 386 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 CDH7Q9ULB5 785 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 NDRG2Q9UN36 371 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 FAN1Q9Y2M0 1017 aa7.66□□□□□ -1.18
DEPDC4-208ENST00000549341 GOLGA6L9A6NEM1 432 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 F8W810 466 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 KIF2AO00139 706 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZBTB39O15060 712 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 MAGEB2O15479 319 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ASAP2O43150 1006 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ARHGAP6O43182 974 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZSCAN12O43309 604 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 TGM5O43548 720 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZNF862O60290 1169 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZNF500O60304 480 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 STX10O60499 249 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 EXOC3O60645 756 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 LILRB3O75022 631 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 OFD1O75665 1012 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 DDHD2O94830 711 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 IPO7O95373 1038 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 AFPP02771 609 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 TUBB4AP04350 444 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 RPL17P18621 184 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 MYH9P35579 1960 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 NAMPTP43490 491 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 OR1G1P47890 313 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 RAB27AP51159 221 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 NPEPPSP55786 919 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 GTF2BQ00403 316 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 TBX2Q13207 712 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 DRP2Q13474 957 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 TFDP1Q14186 410 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 SIM2Q14190 667 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 MXD4Q14582 209 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 EMC2Q15006 297 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 CCDC6Q16204 474 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 CSRP2Q16527 193 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 FIGNQ5HY92 759 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 DNTTIP2Q5QJE6 756 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 LIN9Q5TKA1 542 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 SLFN12LQ6IEE8 588 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ARMCX5Q6P1M9 558 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 CYP26C1Q6V0L0 522 aa7.65□□□□□ -1.18
DEPDC4-208ENST00000549341 ZNF852Q6ZMS4 543 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms