RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 TEX9Q8N6V9 391 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 BBOF1Q8ND07 529 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 NPLOC4Q8TAT6 608 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 INPP5DQ92835 1189 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 SEMA4DQ92854 862 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 R3HDM2Q9Y2K5 976 aaKnown RBP19.84■□□□□ 0.77
MSLN-202ENST00000545450 USH1CQ9Y6N9 552 aa19.84■□□□□ 0.77
MSLN-202ENST00000545450 PEX11AO75192 247 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 ADCY1Q08828 1119 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 CAPSQ13938 189 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.77
MSLN-202ENST00000545450 VSIG1Q86XK7 387 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 HELQQ8TDG4 1101 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 DENND1AQ8TEH3 1009 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 POMGNT1Q8WZA1 660 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 ERP27Q96DN0 273 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 BICD1Q96G01 975 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 SMARCAD1Q9H4L7 1026 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.83■□□□□ 0.77
MSLN-202ENST00000545450 ANAPC7Q9UJX3 599 aa19.83■□□□□ 0.77
MSLN-202ENST00000545450 MANSC4A6NHS7 340 aaPredicted RBP19.83■□□□□ 0.76
MSLN-202ENST00000545450 RRM1P23921 792 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 SLC18A1P54219 525 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 RGMBQ6NW40 437 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 DEPTORQ8TB45 409 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 KCNV2Q8TDN2 545 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 ZNF483Q8TF39 744 aaPredicted RBP19.83■□□□□ 0.76
MSLN-202ENST00000545450 TRAPPC12Q8WVT3 735 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 KCNN1Q92952 543 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 DDX27Q96GQ7 796 aaKnown RBP19.83■□□□□ 0.76
MSLN-202ENST00000545450 C9orf72Q96LT7 481 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 LRRC37BQ96QE4 947 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 UBN1Q9NPG3 1134 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 KCNG1Q9UIX4 513 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 PPME1Q9Y570 386 aa19.83■□□□□ 0.76
MSLN-202ENST00000545450 EDN1P05305 212 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 SLC1A1P43005 524 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 VPS41P49754 854 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 NR1H3Q13133 447 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 KLF1Q13351 362 aaPredicted RBP19.82■□□□□ 0.76
MSLN-202ENST00000545450 LAMC2Q13753 1193 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 CLEC16AQ2KHT3 1053 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 TRABD2AQ86V40 505 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 CCDC89Q8N998 374 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 STK32AQ8WU08 396 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 FBXL18Q96ME1 805 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 PHTF1Q9UMS5 762 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 COQ4Q9Y3A0 265 aa19.82■□□□□ 0.76
MSLN-202ENST00000545450 PRPF4O43172 522 aaKnown RBP eCLIP19.81■□□□□ 0.76
MSLN-202ENST00000545450 TPBGLP0DKB5 382 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 TAF1CQ15572 869 aaPredicted RBP19.81■□□□□ 0.76
MSLN-202ENST00000545450 CMPK2Q5EBM0 449 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 LRRC71Q8N4P6 559 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 FAM13CQ8NE31 585 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 TINF2Q9BSI4 451 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 IGKV6-21A0A0C4DH24 114 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 SLC15A5A6NIM6 579 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 DCTN3O75935 186 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 T-ENOLP0DO92 83 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 GM2AP17900 193 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 GARTP22102 1010 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 TARSP26639 723 aaKnown RBP19.81■□□□□ 0.76
MSLN-202ENST00000545450 ABCD1P33897 745 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 SLC26A2P50443 739 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 GPC3P51654 580 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 PTP4A2Q12974 167 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 DNAJC3Q13217 504 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 TMED2Q15363 201 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 CCNG2Q16589 344 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 IZUMO3Q5VZ72 239 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 PRPF31Q8WWY3 499 aaKnown RBP19.81■□□□□ 0.76
MSLN-202ENST00000545450 SLC7A6OSQ96CW6 309 aaPredicted RBP19.81■□□□□ 0.76
MSLN-202ENST00000545450 FOXP3Q9BZS1 431 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 RNPEPQ9H4A4 650 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 AVENQ9NQS1 362 aaPredicted RBP19.81■□□□□ 0.76
MSLN-202ENST00000545450 ZFATQ9P243 1243 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 HAO1Q9UJM8 370 aa19.81■□□□□ 0.76
MSLN-202ENST00000545450 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.81■□□□□ 0.76
MSLN-202ENST00000545450 LGALS2P05162 132 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 CALRP27797 417 aaKnown RBP19.8■□□□□ 0.76
MSLN-202ENST00000545450 GCAP28676 217 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 MAGEA4P43358 317 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 LIG4P49917 911 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 C11orf91Q3C1V1 193 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 ZNF365Q70YC5 407 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 TDRPQ86YL5 185 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 ENDOVQ8N8Q3 282 aaKnown RBP19.8■□□□□ 0.76
MSLN-202ENST00000545450 PPTC7Q8NI37 304 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 AFG1LQ8WV93 481 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 EMID1Q96A84 441 aaPredicted RBP19.8■□□□□ 0.76
MSLN-202ENST00000545450 ZBTB10Q96DT7 871 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 FAM81BQ96LP2 452 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 PAIP2Q9BPZ3 127 aaKnown RBP19.8■□□□□ 0.76
MSLN-202ENST00000545450 FAM167BQ9BTA0 163 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 MROH7Q68CQ1 1323 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 K7ERI5 159 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 SLC10A3P09131 477 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 LINGO3P0C6S8 592 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 SPARCL1Q14515 664 aa19.8■□□□□ 0.76
MSLN-202ENST00000545450 SPDYAQ5MJ70 313 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms