RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PODXLO00592 558 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 SYN3O14994 580 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 TGM5O43548 720 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 PPP6R2O75170 966 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 YEATS4O95619 227 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 CLTAP09496 248 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 WEE2P0C1S8 567 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 CXCL8P10145 99 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 GAP43P17677 238 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 RPL17P18621 184 aaKnown RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 RPL9P32969 192 aaKnown RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 STAT6P42226 847 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 MATR3P43243 847 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 GPLD1P80108 840 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 PTPN21Q16825 1174 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 SLC10A6Q3KNW5 377 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 LILRA6Q6PI73 481 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 PRSS55Q6UWB4 352 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 CD300LGQ6UXG3 332 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 ANKS3Q6ZW76 656 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 CEP57Q86XR8 500 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 LINC00301Q8NCQ3 95 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 C3orf58Q8NDZ4 430 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 LNX1Q8TBB1 728 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 EDAQ92838 391 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 NSUN5Q96P11 429 aaKnown RBP8.35□□□□□ -1.07
SNHG1-223ENST00000545440 TSPAN18Q96SJ8 248 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 HAPLN2Q9GZV7 340 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 ZHX3Q9H4I2 956 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 GOLGA2P5Q9HBQ8 144 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 NPHS2Q9NP85 383 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 OLFML3Q9NRN5 406 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 MTRRQ9UBK8 725 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 AK5Q9Y6K8 562 aa8.35□□□□□ -1.07
SNHG1-223ENST00000545440 KIF26AQ9ULI4 1882 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 CLUHO75153 1309 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 PATJQ8NI35 1801 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 MYH10P35580 1976 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 A0A0B4J269 797 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TTC26A0AVF1 554 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 FRMD3A2A2Y4 597 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SPTLC2O15270 562 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 OGTO15294 1046 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 XPOTO43592 962 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.073e-14■■■■■ 31.4
SNHG1-223ENST00000545440 F13A1P00488 732 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 POU2F2P09086 479 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ZSCAN22P10073 491 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 CYP3A5P20815 502 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TKTP29401 623 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 HOXA9P31269 272 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ZXDAP98168 799 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SIGLEC14Q08ET2 396 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ALCAMQ13740 583 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TSNAXIP1Q2TAA8 658 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 LIN9Q5TKA1 542 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ATL3Q6DD88 541 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SLC39A4Q6P5W5 647 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 DYMQ7RTS9 669 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SFR1Q86XK3 245 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 PALB2Q86YC2 1186 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 STAMQ92783 540 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ACSF2Q96CM8 615 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 CLSTN3Q9BQT9 956 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 MSTO1Q9BUK6 570 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TNMDQ9H2S6 317 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 CUEDC2Q9H467 287 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 WDR6Q9NNW5 1121 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TUBGCP4Q9UGJ1 667 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 UBQLN1Q9UMX0 589 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 SORCS3Q9UPU3 1222 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 HELZP42694 1942 aaKnown RBP8.34□□□□□ -1.07
SNHG1-223ENST00000545440 TICRRQ7Z2Z1 1910 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 FANCMQ8IYD8 2048 aa8.34□□□□□ -1.07
SNHG1-223ENST00000545440 ANAPC1Q9H1A4 1944 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 A0A087X0B3 334 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CCDC195A0A1B0GUA6 201 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 MYMKA6NI61 221 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 CUTAO60888 179 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 RFPL2O75678 378 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 C8AP07357 584 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 ADRB2P07550 413 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 COL4A2P08572 1712 aa8.33□□□□□ -1.08
SNHG1-223ENST00000545440 HNRNPA1P09651 372 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNHG1-223ENST00000545440 NMT1P30419 496 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms