RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TCF4P15884 667 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 PSMA2P25787 234 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 NDST1P52848 882 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 PMS2P54278 862 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 CNGA2Q16280 664 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 C17orf99Q6UX52 265 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 DPH6Q7L8W6 267 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 KATNAL1Q9BW62 490 aa18.02■□□□□ 0.48
PTPRO-209ENST00000543886 DDX56Q9NY93 547 aaKnown RBP18.02■□□□□ 0.48
PTPRO-209ENST00000543886 R3HDM2Q9Y2K5 976 aaKnown RBP18.02■□□□□ 0.48
PTPRO-209ENST00000543886 PI4K2BG5E9Z4 385 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 ACTN2P35609 894 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 IRX5P78411 483 aaPredicted RBP18.02■□□□□ 0.47
PTPRO-209ENST00000543886 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 PTK6Q13882 451 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 CCNG2Q16589 344 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 DNAJC21Q5F1R6 531 aaKnown RBP18.02■□□□□ 0.47
PTPRO-209ENST00000543886 CHADLQ6NUI6 762 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 IFNL1Q8IU54 200 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 BEST2Q8NFU1 509 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 ATL2Q8NHH9 583 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 ART4Q93070 314 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 SLITRK1Q96PX8 696 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 NT5C1AQ9BXI3 368 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 WHRNQ9P202 907 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 TJP2Q9UDY2 1190 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 KIAA1257Q9ULG3 409 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 Q9Y3F1 56 aa18.02■□□□□ 0.47
PTPRO-209ENST00000543886 HAS3O00219 553 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 ERBB2P04626 1255 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 ATF7P17544 494 aaPredicted RBP18.01■□□□□ 0.47
PTPRO-209ENST00000543886 AXLP30530 894 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 RFC1P35251 1148 aaPredicted RBP18.01■□□□□ 0.47
PTPRO-209ENST00000543886 GSCP56915 257 aaPredicted RBP18.01■□□□□ 0.47
PTPRO-209ENST00000543886 COPS2P61201 443 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 BEX3Q00994 111 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 ATP13A4Q4VNC1 1196 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 XYLT1Q86Y38 959 aa18.01■□□□□ 0.47
PTPRO-209ENST00000543886 PABPC3Q9H361 631 aaKnown RBP18.01■□□□□ 0.47
PTPRO-209ENST00000543886 TULP2O00295 520 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 TNPO2O14787 897 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 TJP3O95049 919 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 EIF3BP55884 814 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 PDCLQ13371 301 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 HIC1Q14526 733 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ZNF268Q14587 947 aaPredicted RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 SLMAPQ14BN4 828 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 KAZNQ674X7 775 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 DENND2CQ68D51 928 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 IPO4Q8TEX9 1081 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 FNIP1Q8TF40 1166 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 SNF8Q96H20 258 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 CAPS2Q9BXY5 557 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 PIN4Q9Y237 131 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 HES2Q9Y543 173 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 TREHO43280 583 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ATF2P15336 505 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ADAM17P78536 824 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 SNX17Q15036 470 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 SPOCD1Q6ZMY3 1216 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ANKS1BQ7Z6G8 1248 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 JOSD2Q8TAC2 188 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 ZMAT2Q96NC0 199 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 APOL6Q9BWW8 343 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 NXF3Q9H4D5 531 aaKnown RBP18■□□□□ 0.47
PTPRO-209ENST00000543886 TUBGCP4Q9UGJ1 667 aa18■□□□□ 0.47
PTPRO-209ENST00000543886 TRIP11Q15643 1979 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 LRRD1A4D1F6 860 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
PTPRO-209ENST00000543886 RECQL4O94761 1208 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 ITIH2P19823 946 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 NR1D1P20393 614 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 GPD2P43304 727 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 SKOR1P84550 965 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
PTPRO-209ENST00000543886 HADHQ16836 314 aaKnown RBP17.99■□□□□ 0.47
PTPRO-209ENST00000543886 MFSD7Q6UXD7 560 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 ZNF365Q70YC5 407 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 POLNQ7Z5Q5 900 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 UBA3Q8TBC4 463 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 CXCL16Q9H2A7 254 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 CNTN3Q9P232 1028 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 SNX9Q9Y5X1 595 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 GNAT1P11488 350 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 KRT10P13645 584 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 PTPN7P35236 360 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 GABRB2P47870 512 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 INHBEP58166 350 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 ZNF200P98182 395 aaPredicted RBP17.99■□□□□ 0.47
PTPRO-209ENST00000543886 LMNB2Q03252 620 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 STILQ15468 1287 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 KRT71Q3SY84 523 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 GLRA4Q5JXX5 417 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 LCLAT1Q6UWP7 414 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 KDM7AQ6ZMT4 941 aa17.99■□□□□ 0.47
PTPRO-209ENST00000543886 SAPCD2Q86UD0 394 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms