RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PRUNE2Q8WUY3 3088 aa13.57□□□□□ -0.24
TSPAN9-207ENST00000539631 CCDC195A0A1B0GUA6 201 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 MBTPS2O43462 519 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 TPM2P07951 284 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 PTPN1P18031 435 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 PON1P27169 355 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 APBA1Q02410 837 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 INCA1Q0VD86 236 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 KCNMA1Q12791 1236 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 CUL2Q13617 745 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 APTXQ7Z2E3 356 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 ACOT1Q86TX2 421 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 UNC93AQ86WB7 457 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 SMRP1Q8NCR6 262 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 CMASQ8NFW8 434 aaPredicted RBP13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 KAT5Q92993 513 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 MYLPFQ96A32 169 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 CISHQ9NSE2 258 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 ZDHHC7Q9NXF8 308 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 ABI2Q9NYB9 513 aaPredicted RBP13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 MAFFQ9ULX9 164 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 INSL5Q9Y5Q6 135 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 DENND4AQ7Z401 1863 aa13.56□□□□□ -0.24
TSPAN9-207ENST00000539631 MYH10P35580 1976 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 CCL16O15467 120 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 CILPO75339 1184 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 SOAT2O75908 522 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 CAVIN2O95810 425 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 HAPLN1P10915 354 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 KCNQ1P51787 676 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 ZNF445P59923 1031 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 SMAD4Q13485 552 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 NFE2Q16621 373 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 GJB7Q6PEY0 223 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 SPATA2LQ8IUW3 424 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 UBR7Q8N806 425 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 B3GALNT2Q8NCR0 500 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 ZNF707Q96C28 371 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 PCED1BQ96HM7 432 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 PRKD2Q9BZL6 878 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 ADAM7Q9H2U9 754 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 SIX2Q9NPC8 291 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 YIPF1Q9Y548 306 aa13.55□□□□□ -0.24
TSPAN9-207ENST00000539631 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 CLDN5O00501 218 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 PAPLNO95428 1278 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 LRG1P02750 347 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 HNRNPA1P09651 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 COL9A1P20849 921 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 CYP2F1P24903 491 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 HOXA9P31269 272 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 GPR15P49685 360 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 CYP27A1Q02318 531 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 GCNT1Q02742 428 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 ITIH3Q06033 890 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 TWF1Q12792 350 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 PTCRAQ6ISU1 281 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 CRYBG2Q8N1P7 616 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 ATXN2LQ8WWM7 1075 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 SMG7Q92540 1137 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 KREMEN1Q96MU8 473 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 SEPT5Q99719 369 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 B3GNT5Q9BYG0 378 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 AJAP1Q9UKB5 411 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 NOTCH4Q99466 2003 aa13.54□□□□□ -0.24
TSPAN9-207ENST00000539631 XIRP2A4UGR9 3374 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms