RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 GINS2Q9Y248 185 aa5.97□□□□□ -1.45
CTNNA1-239ENST00000523685 PLAAQ9Y263 795 aa5.97□□□□□ -1.45
CTNNA1-239ENST00000523685 TIMM13Q9Y5L4 95 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-239ENST00000523685 FRMPD4Q14CM0 1322 aa5.97□□□□□ -1.45
CTNNA1-239ENST00000523685 MYH6P13533 1939 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 TMEM221A6NGB7 291 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CCDC69A6NI79 296 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 M0R296 226 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 MEIS2O14770 477 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 PER2O15055 1255 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 NRDCO43847 1150 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 STAG3L1P0CL83 205 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SCG2P13521 617 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 GSPT1P15170 499 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 ITGB5P18084 799 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 NAT1P18440 290 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SP100P23497 879 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 KIF5BP33176 963 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 ANTXR2P58335 489 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 ERVFC1P60507 584 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 GPR85P60893 370 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 RPL11P62913 178 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 MTMR1Q13613 665 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CAMK1Q14012 370 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 HERC4Q5GLZ8 1057 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 MARCH8Q5T0T0 291 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 TTC22Q5TAA0 569 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 XRRA1Q6P2D8 792 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CASC1Q6TDU7 716 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 HEATR3Q7Z4Q2 680 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 RTN4RL1Q86UN2 441 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SUGP1Q8IWZ8 645 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CMTR2Q8IYT2 770 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 LILRA2Q8N149 483 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SPPL3Q8TCT6 385 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 RUFY2Q8WXA3 655 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 EDAQ92838 391 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 NINJ1Q92982 152 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 ZNF689Q96CS4 500 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 ASIC4Q96FT7 647 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CDHR1Q96JP9 859 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 PGBD1Q96JS3 809 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 PPP1R16BQ96T49 567 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 APOL5Q9BWW9 433 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SPZ1Q9BXG8 430 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 SMARCAD1Q9H4L7 1026 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 TLE6Q9H808 572 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 PADI3Q9ULW8 664 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 CTNND2Q9UQB3 1225 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 USP15Q9Y4E8 981 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 PCDHA2Q9Y5H9 948 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 TRPV2Q9Y5S1 764 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 LAMA4Q16363 1823 aa5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 BAZ2BQ9UIF8 2168 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-239ENST00000523685 DENND3A2RUS2 1198 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 MBLAC1A4D2B0 266 aaPredicted RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 RRN3P2A6NIE6 340 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 TBKBP1A7MCY6 615 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 NOTOA8MTQ0 251 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 DDX39AO00148 427 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PRC1O43663 620 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 CRTAMO95727 393 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 CHMLP26374 656 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 GUCY1A3Q02108 690 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 LSAMPQ13449 338 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PLCB4Q15147 1175 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 ZNF662Q6ZS27 426 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 TRMT1LQ7Z2T5 733 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 MB21D2Q8IYB1 491 aaPredicted RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 THNSL1Q8IYQ7 743 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 SRBD1Q8N5C6 995 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 EFHBQ8N7U6 833 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PRSS33Q8NF86 280 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 IGDCC4Q8TDY8 1250 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 P2RX5Q93086 422 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 CHAMP1Q96JM3 812 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 MSLNLQ96KJ4 702 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PCYT2Q99447 389 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 SDF4Q9BRK5 362 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 FTHL17Q9BXU8 183 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 LRRC2Q9BYS8 371 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 CELF4Q9BZC1 486 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 KCNH6Q9H252 994 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 SP110Q9HB58 689 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 LY9Q9HBG7 655 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 TRIM39Q9HCM9 518 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 JADE2Q9NQC1 790 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 SLC9A2Q9UBY0 812 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 ACSL6Q9UKU0 697 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PCDHA6Q9UN73 950 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PCDHB7Q9Y5E2 793 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 PCDHA8Q9Y5H6 950 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 RBM8AQ9Y5S9 174 aaKnown RBP5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 UBIAD1Q9Y5Z9 338 aa5.95□□□□□ -1.46
CTNNA1-239ENST00000523685 COL4A6Q14031 1691 aa5.94□□□□□ -1.46
CTNNA1-239ENST00000523685 PSPNO60542 156 aa5.94□□□□□ -1.46
CTNNA1-239ENST00000523685 RPS6KA5O75582 802 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms