RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 TMPRSS15P98073 1019 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CDK16Q00536 496 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 POU5F1Q01860 360 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYP24A1Q07973 514 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NFX1Q12986 1120 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 STX5Q13190 355 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 STX3Q13277 289 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ART3Q13508 389 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CUL2Q13617 745 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LAMB3Q13751 1172 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BLMHQ13867 455 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CYLC2Q14093 348 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DPYSL3Q14195 570 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRPSAP1Q14558 356 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 COG2Q14746 738 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PSMD6Q15008 389 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRRC14Q15048 493 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIP13Q15645 432 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PDCD2Q16342 344 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ECM1Q16610 540 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PTPROQ16827 1216 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRMT5Q32P41 509 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAP7D1Q3KQU3 841 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SUPT20HL1Q3ZLR7 823 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC153Q494R4 210 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GALNTL6Q49A17 601 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CRY2Q49AN0 593 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 EPC2Q52LR7 807 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TAF1BQ53T94 588 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CMPK2Q5EBM0 449 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF667Q5HYK9 610 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 C6orf132Q5T0Z8 1188 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 STXBP5Q5T5C0 1151 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 METTL21CQ5VZV1 264 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DESI1Q6ICB0 168 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SWSAP1Q6NVH7 229 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 IRGCQ6NXR0 463 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM154Q6P9G4 183 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 AAGABQ6PD74 315 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 GJB7Q6PEY0 223 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LVRNQ6Q4G3 990 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ADGRD1Q6QNK2 874 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 POTEAQ6S8J7 498 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM270Q6UE05 265 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 C16orf89Q6UX73 402 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NSMFQ6X4W1 530 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZPBP2Q6X784 338 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KYAT3Q6YP21 454 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RGS9BPQ6ZS82 235 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SV2AQ7L0J3 742 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NLRP9Q7RTR0 991 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRMT1LQ7Z2T5 733 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NET1Q7Z628 596 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRUNE1Q86TP1 453 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SETD3Q86TU7 594 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MTDHQ86UE4 582 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM83AQ86UY5 434 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRABD2AQ86V40 505 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LAPTM4BQ86VI4 370 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC47A2Q86VL8 602 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC26A11Q86WA9 606 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RASSF3Q86WH2 238 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRRC6Q86X45 466 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIM50Q86XT4 487 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NT5DC4Q86YG4 428 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PHF13Q86YI8 300 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 RHPN2Q8IUC4 686 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZDHHC17Q8IUH5 632 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 MFN1Q8IWA4 741 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SDR16C5Q8N3Y7 309 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC24Q8N4L8 307 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PROCA1Q8NCQ7 364 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 AGBL3Q8NEM8 1001 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 DNERQ8NFT8 737 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NKX2-3Q8TAU0 364 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LNX1Q8TBB1 728 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ACMSDQ8TDX5 336 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 EPS8L3Q8TE67 593 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PXYLP1Q8TE99 480 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF384Q8TF68 577 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 NLRP7Q8WX94 980 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF606Q8WXB4 792 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 CPA5Q8WXQ8 436 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SHC3Q92529 594 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 JADE3Q92613 823 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF75CPQ92670 426 aaPredicted RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 KRT35Q92764 455 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 UPF1Q92900 1129 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPP2R3CQ969Q6 453 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PBXIP1Q96AQ6 731 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 E2F7Q96AV8 911 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPP1R14BQ96C90 147 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAF2Q96CS3 445 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 SHISA4Q96DD7 197 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 ERP27Q96DN0 273 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 BORCS6Q96GS4 357 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRGUKQ96M69 825 aa2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 HEXIM2Q96MH2 286 aaKnown RBP2.16□□□□□ -2.06
RNU1-40P-201ENST00000516816 C8orf37Q96NL8 207 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms