RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	TLR3	O15455	904 aa	Known RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	RARA	P10276	462 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	NFX1	Q12986	1120 aa	Known RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SURF1	Q15526	300 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	KCNA10	Q16322	511 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	MAATS1	Q7Z4T9	603 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ATG4A	Q8WYN0	398 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ACSF2	Q96CM8	615 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	FAM210A	Q96ND0	272 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SNTG2	Q9NY99	539 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	PIN4	Q9Y237	131 aa	Known RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	GOLGA6L10	A0A0M3HER8	536 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ASGR1	P07306	291 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	MCF2	P10911	925 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	TNFRSF8	P28908	595 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	DENND1B	Q6P3S1	775 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	B4GALNT4	Q76KP1	1039 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	RSRC1	Q96IZ7	334 aa	Known RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	CCDC114	Q96M63	670 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ZIM3	Q96PE6	472 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ADAMTS10	Q9H324	1103 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SLITRK6	Q9H5Y7	841 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SNX24	Q9Y343	169 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	TRIP11	Q15643	1979 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	ANK1	P16157	1881 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	GOLGA8S	H3BPF8	625 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	PIK3R2	O00459	728 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	GPR32	O75388	356 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SNCB	Q16143	134 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	FAM187B	Q17R55	369 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	LIN9	Q5TKA1	542 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	GDF6	Q6KF10	455 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SESTD1	Q86VW0	696 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	CAVIN3	Q969G5	261 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	HHIPL1	Q96JK4	782 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	MCEE	Q96PE7	176 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	SPC25	Q9HBM1	224 aa		11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	AVEN	Q9NQS1	362 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK18-222	ENST00000515494	COL1A2	P08123	1366 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	PPEF2	O14830	753 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	MMP8	P22894	467 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	HOXA11	P31270	313 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	AARS	P49588	968 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	GRIK3	Q13003	919 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ZFYVE27	Q5T4F4	411 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	CCDC50	Q8IVM0	306 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	OR2W6P	Q8NHA6	318 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	RUBCN	Q92622	972 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ARL8A	Q96BM9	186 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ACAP3	Q96P50	834 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	NAP1L3	Q99457	506 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	DDX20	Q9UHI6	824 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	CYTH4	Q9UIA0	394 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	UTP11	Q9Y3A2	253 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	PI4K2B	G5E9Z4	385 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	SEPT4	O43236	478 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	IL18RAP	O95256	599 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	TMEM132D	Q14C87	1099 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	KCTD16	Q68DU8	428 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	CCDC137	Q6PK04	289 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ANKS1B	Q7Z6G8	1248 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	PHF13	Q86YI8	300 aa	Predicted RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	JAML	Q86YT9	394 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	CXorf38	Q8TB03	319 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	KIF12	Q96FN5	646 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	NXF3	Q9H4D5	531 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494		F8VP50	259 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	PROSC	O94903	275 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	OGDH	Q02218	1023 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	PLEKHA7	Q6IQ23	1121 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	HPDL	Q96IR7	371 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ZMAT2	Q96NC0	199 aa	Known RBP	11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	ADPGK	Q9BRR6	497 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	RNF39	Q9H2S5	420 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	SRRD	Q9UH36	339 aa		11.12	□□□□□ -0.63
CDK18-222	ENST00000515494	HAS3	O00219	553 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	ATP2C2	O75185	946 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	MYBL1	P10243	752 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	EIF4B	P23588	611 aa	Known RBP	11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	RAD23B	P54727	409 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	POU5F1B	Q06416	359 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	TRIM72	Q6ZMU5	477 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	CCDC105	Q8IYK2	499 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	SH3TC2	Q8TF17	1288 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	WHAMM	Q8TF30	809 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	RNF25	Q96BH1	459 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	ELOVL4	Q9GZR5	314 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	HSF2BP	O75031	334 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	PHF2	O75151	1096 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	CTNNA2	P26232	953 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	PLTP	P55058	493 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	SNX17	Q15036	470 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	SIX1	Q15475	284 aa	Predicted RBP	11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	CFAP58	Q5T655	872 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	TXNRD3NB	Q6F5E7	133 aa		11.11	□□□□□ -0.63
CDK18-222	ENST00000515494	DCUN1D2	Q6PH85	259 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms