RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LSMEM2Q8N112 164 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PELI3Q8N2H9 469 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYNPOQ8N3V7 929 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDCL2Q8N4E4 241 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BANK1Q8NDB2 785 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ST13P5Q8NFI4 369 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FOXD4L4Q8WXT5 416 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SECISBP2LQ93073 1101 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BICD1Q96G01 975 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM47Q96LD4 638 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAP1L3Q99457 506 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 VCPKMTQ9H867 229 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SYNPO2LQ9H987 977 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CARS2Q9HA77 564 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMBIM4Q9HC24 238 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAK1IP1Q9NWT1 392 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TXNDC16Q9P2K2 825 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRKAG2Q9UGJ0 569 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF221Q9UK13 617 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MINPP1Q9UNW1 487 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 LZTS1Q9Y250 596 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BTBD19C9JJ37 291 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 F8VZ95 297 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PIK3CDO00329 1044 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB39O15060 712 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHMP2AO43633 222 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GREM1O60565 184 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDE8AO60658 829 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DNAJC8O75937 253 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IGLV3-19P01714 112 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF865P0CJ78 1059 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IBSPP21815 317 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CASQ1P31415 396 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCYT1AP49585 367 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 NEK3P51956 506 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ERVK-21P61565 698 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNJ2P63252 427 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CEBPZQ03701 1054 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNASELQ05823 741 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACVR2BQ13705 512 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 AUHQ13825 339 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLCB4Q15147 1175 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAPK11Q15759 364 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PFKFB3Q16875 520 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPECC1Q5M775 1068 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPDYCQ5MJ68 293 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLA2G2CQ5R387 149 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 C6orf10Q5SRN2 563 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 LLGL2Q6P1M3 1020 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC30A10Q6XR72 485 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 DNM1P46Q6ZS02 220 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIPOR1Q6ZS17 1223 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHST3Q7LGC8 479 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SRGAP1Q7Z6B7 1085 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 LYPD6Q86Y78 171 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 EFCAB13Q8IY85 973 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC63Q8NA47 563 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPATA4Q8NEY3 305 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 KBTBD7Q8WVZ9 684 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RAPGEF4Q8WZA2 1011 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CELF1Q92879 486 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 HVCN1Q96D96 273 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PGM2Q96G03 612 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZFP91Q96JP5 570 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAIP2Q9BPZ3 127 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHST8Q9H2A9 424 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTIF3Q9H2K0 278 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GBA2Q9HCG7 927 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZC4H2Q9NQZ6 224 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 OLFML3Q9NRN5 406 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC38A7Q9NVC3 462 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 MKS1Q9NXB0 559 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCYOX1Q9UHG3 505 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CNOT7Q9UIV1 285 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMC3Q9UQE7 1217 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIF1Q5UIP0 2472 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 A6NJR5 290 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC36A6NLP5 189 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM6-TRIM34B2RNG4 842 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PFDN6O15212 129 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 GAS8O95995 478 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZFYP08048 801 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCMT1P22061 227 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYLC1P35663 651 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCNFP41002 786 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 INPP1P49441 399 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ELF3P78545 371 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 OCRLQ01968 901 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACTN3Q08043 901 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 WASHC5Q12768 1159 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKRD20A8PQ5CZ79 823 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 KANK3Q6NY19 840 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC174Q6PII3 467 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 RSPO2Q6UXX9 243 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 DSTYKQ6XUX3 929 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 VN1R5Q7Z5H4 357 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB33Q86T24 672 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 NOSTRINQ8IVI9 506 aa1.76□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKK1Q8NFD2 765 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms