RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SAYSD1Q9NPB0 183 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 USTQ9Y2C2 406 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 POC1B-GALNT4F8VUJ3 575 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 ATP2A1O14983 1001 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 PROSCO94903 275 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 UPP2O95045 317 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 ABHD2P08910 425 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 LINGO3P0C6S8 592 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 TPBGLP0DKB5 382 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 KLRC2P26717 231 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 SLC1A1P43005 524 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 RAD23BP54727 409 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 TAS2R40P59535 323 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 NOMO3P69849 1222 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 PKN2Q16513 984 aaKnown RBP17.27■□□□□ 0.36
COL6A1-206ENST00000498614 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 RIBC1Q8N443 379 aaPredicted RBP17.27■□□□□ 0.36
COL6A1-206ENST00000498614 ZCCHC9Q8N567 271 aaKnown RBP17.27■□□□□ 0.36
COL6A1-206ENST00000498614 BBOF1Q8ND07 529 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 STK32AQ8WU08 396 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 SLC7A3Q8WY07 619 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 OSBPL1AQ9BXW6 950 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 LRRC42Q9Y546 428 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 NUB1Q9Y5A7 615 aa17.27■□□□□ 0.36
COL6A1-206ENST00000498614 OTOFQ9HC10 1997 aa17.27■□□□□ 0.35
COL6A1-206ENST00000498614 CBX6O95503 412 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 EPHB2P29323 1055 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 RPA3P35244 121 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 SSR1P43307 286 aaKnown RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 NAMPTP43490 491 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 CST9Q5W186 159 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 GLIS1Q8NBF1 620 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 RBBP8NLQ8NC74 664 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 INPP5DQ92835 1189 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 EDF1O60869 148 aaKnown RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ABCD1P33897 745 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ARL2P36404 184 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 NOP14P78316 857 aaKnown RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 FASTKD3Q14CZ7 662 aaKnown RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 SLC1A5Q15758 541 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 GSTA5Q7RTV2 222 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ABRAQ8N0Z2 381 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 TTC8Q8TAM2 541 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ZNF483Q8TF39 744 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ANKRD27Q96NW4 1050 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 OSBPL8Q9BZF1 889 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-206ENST00000498614 ZFATQ9P243 1243 aa17.26■□□□□ 0.35
COL6A1-206ENST00000498614 PRPF4O43172 522 aaKnown RBP eCLIP17.25■□□□□ 0.359e-6■□□□□ 10.5
COL6A1-206ENST00000498614 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
COL6A1-206ENST00000498614 CD58P19256 250 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 MAMLD1Q13495 774 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 PDK4Q16654 411 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 SLFN12LQ6IEE8 588 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 RGS9BPQ6ZS82 235 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 CAPN12Q6ZSI9 719 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 C10orf82Q8WW14 230 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 NUDCD1Q96RS6 583 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 EME2A4GXA9 379 aaPredicted RBP17.25■□□□□ 0.35
COL6A1-206ENST00000498614 TTLL13PA6NNM8 815 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 DCTN3O75935 186 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 ATG7O95352 703 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 PIGRP01833 764 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 ZSCAN5DPP0CG00 497 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 FGFR1P11362 822 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 SIP14410 1827 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 PTP4A2Q12974 167 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 TREML2Q5T2D2 321 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 ANO7Q6IWH7 933 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 MRRFQ96E11 262 aaKnown RBP17.25■□□□□ 0.35
COL6A1-206ENST00000498614 YIPF3Q9GZM5 350 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 KLHL11Q9NVR0 708 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 HOXC10Q9NYD6 342 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 CENPFP49454 3210 aa17.25■□□□□ 0.35
COL6A1-206ENST00000498614 CNTNAP2Q9UHC6 1331 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 A0A0B4J269 797 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 H0Y3Z8 333 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 LDHAP00338 332 aaKnown RBP17.24■□□□□ 0.35
COL6A1-206ENST00000498614 KRT15P19012 456 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 GJA5P36382 358 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 NR1H3Q13133 447 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 CAPSQ13938 189 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 RHOT1Q8IXI2 618 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 LRRC8CQ8TDW0 803 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 ENO4A6NNW6 628 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
COL6A1-206ENST00000498614 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms