RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 UNC80Q8N2C7 3258 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 EEF1GP26641 437 aaKnown RBP20.74■□□□□ 0.91
HDAC4-212ENST00000495497 ZNF165P49910 485 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 TWF1Q12792 350 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 CETN1Q12798 172 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 SMAD2Q15796 467 aaKnown RBP20.74■□□□□ 0.91
HDAC4-212ENST00000495497 PUS10Q3MIT2 529 aaKnown RBP20.74■□□□□ 0.91
HDAC4-212ENST00000495497 VWA3BQ502W6 1294 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 ATAT1Q5SQI0 421 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 MYLPFQ96A32 169 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 TWNKQ96RR1 684 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 SEPT5Q99719 369 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-212ENST00000495497 BPIFA3Q9BQP9 254 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 INTS2Q9H0H0 1204 aaKnown RBP20.74■□□□□ 0.91
HDAC4-212ENST00000495497 HSD3B7Q9H2F3 369 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 CYP3A43Q9HB55 503 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 PIDD1Q9HB75 910 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 YIPF1Q9Y548 306 aa20.74■□□□□ 0.91
HDAC4-212ENST00000495497 PES1O00541 588 aaKnown RBP20.73■□□□□ 0.91
HDAC4-212ENST00000495497 LRG1P02750 347 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 HNRNPA1P09651 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-212ENST00000495497 SLC9A1P19634 815 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 CYP2F1P24903 491 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 NTHL1P78549 312 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 APBA1Q02410 837 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 CBX2Q14781 532 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-212ENST00000495497 KRT31Q15323 416 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 MGAT5BQ3V5L5 792 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 ACOT1Q86TX2 421 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 SPATA2LQ8IUW3 424 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-212ENST00000495497 ARHGEF19Q8IW93 802 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 WHAMMQ8TF30 809 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 KAT5Q92993 513 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 NDST4Q9H3R1 872 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 POMKQ9H5K3 350 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 HCFC1R1Q9NWW0 138 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 GCNT4Q9P109 453 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 MAFFQ9ULX9 164 aa20.73■□□□□ 0.91
HDAC4-212ENST00000495497 PAPLNO95428 1278 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 HOXA9P31269 272 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 MTHFRP42898 656 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 GPR15P49685 360 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 CYP27A1Q02318 531 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 INCA1Q0VD86 236 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 SMARCB1Q12824 385 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 CUL2Q13617 745 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 NFE2Q16621 373 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-212ENST00000495497 RRAGAQ7L523 313 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 GRASPQ7Z6J2 395 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-212ENST00000495497 B3GALNT2Q8NCR0 500 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 MYCBPAPQ8TBZ2 947 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 SPPL2BQ8TCT7 592 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 C2orf15Q8WU43 125 aaKnown RBP20.72■□□□□ 0.91
HDAC4-212ENST00000495497 RIPOR3Q96MK2 946 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 NT5C1BQ96P26 610 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 ELOVL4Q9GZR5 314 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 VPS16Q9H269 839 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 CISHQ9NSE2 258 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 CEP72Q9P209 647 aa20.72■□□□□ 0.91
HDAC4-212ENST00000495497 MTCL1Q9Y4B5 1905 aaKnown RBP20.71■□□□□ 0.91
HDAC4-212ENST00000495497 CLDN5O00501 218 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 CILPO75339 1184 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 HAPLN1P10915 354 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-212ENST00000495497 SP100P23497 879 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-212ENST00000495497 IQCB1Q15051 598 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 ZNF394Q53GI3 561 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 TJAP1Q5JTD0 557 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 SDHAF4Q5VUM1 108 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 PHLDB3Q6NSJ2 640 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 GBP6Q6ZN66 633 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 UNC93AQ86WB7 457 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 PPM1KQ8N3J5 372 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 GPR152Q8TDT2 470 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 PCED1BQ96HM7 432 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 B3GNT5Q9BYG0 378 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 CBX8Q9HC52 389 aa20.71■□□□□ 0.91
HDAC4-212ENST00000495497 DNMT3BQ9UBC3 853 aaKnown RBP20.71■□□□□ 0.91
HDAC4-212ENST00000495497 SMTNL1A8MU46 457 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 XYLBO75191 536 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 ATP1A3P13637 1013 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 ZNF18P17022 549 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 ATF6P18850 670 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 CDK11BP21127 795 aaKnown RBP20.7■□□□□ 0.9
HDAC4-212ENST00000495497 BDNFP23560 247 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 ALDH1A3P47895 512 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 DDR2Q16832 855 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 GJB7Q6PEY0 223 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 RTL10Q7L3V2 364 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 HS6ST3Q8IZP7 471 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 C12orf29Q8N999 325 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 STKLD1Q8NE28 680 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 GIPC2Q8TF65 315 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 FAXDC2Q96IV6 333 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 NECAB3Q96P71 396 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-212ENST00000495497 FAM50BQ9Y247 325 aa20.7■□□□□ 0.9
HDAC4-212ENST00000495497 PON1P27169 355 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 TUFMP49411 452 aaKnown RBP20.69■□□□□ 0.9
HDAC4-212ENST00000495497 COPB1P53618 953 aaKnown RBP20.69■□□□□ 0.9
HDAC4-212ENST00000495497 CACNA2D1P54289 1103 aa20.69■□□□□ 0.9
HDAC4-212ENST00000495497 MAPRE1Q15691 268 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms