RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 VPS45Q9NRW7 570 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 ANKFY1Q9P2R3 1169 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 LRWD1Q9UFC0 647 aa14.21□□□□□ -0.13
HDAC3-213ENST00000492506 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 ANKRD11Q6UB99 2663 aaPredicted RBP14.21□□□□□ -0.13
HDAC3-213ENST00000492506 LAMA5O15230 3695 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 ANAPC1Q9H1A4 1944 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 SFI1A8K8P3 1242 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 TRDMT1O14717 391 aaKnown RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 PPEF2O14830 753 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 ATP8B1O43520 1251 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 FGF19O95750 216 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 CCDC192P0DO97 292 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 ATF6P18850 670 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 TYMPP19971 482 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 CYP3A5P20815 502 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 CYP4F8P98187 520 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 MCL1Q07820 350 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 COL9A2Q14055 689 aaPredicted RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 PDIA5Q14554 519 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 TTC38Q5R3I4 469 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 OVOS1Q6IE37 1185 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 TMEM161BQ8NDZ6 487 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 OR10T2Q8NGX3 314 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 LPIN3Q9BQK8 851 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 FBRSL1Q9HCM7 1045 aaKnown RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 GKN1Q9NS71 199 aa14.2□□□□□ -0.14
HDAC3-213ENST00000492506 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 ASCC3Q8N3C0 2202 aaKnown RBP14.2□□□□□ -0.14
HDAC3-213ENST00000492506 GIPC1O14908 333 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 FAM189A1O60320 539 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 EGFP01133 1207 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 MAPTP10636 758 aaKnown RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 TNFSF9P41273 254 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ANAPC15P60006 121 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ARHGAP15Q53QZ3 475 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 RNF43Q68DV7 783 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 UNQ6494/PRO21346Q6UXR6 183 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ZPBP2Q6X784 338 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 USP37Q86T82 979 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 TMEM150AQ86TG1 271 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ITIH5Q86UX2 942 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 CAMKK1Q8N5S9 505 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 KDF1Q8NAX2 398 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 SNX29Q8TEQ0 813 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 SPIRE2Q8WWL2 714 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 FOXP1Q9H334 677 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 SH2B1Q9NRF2 756 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ZMIZ1Q9ULJ6 1067 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 UBQLN1Q9UMX0 589 aaKnown RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 SLC8A2Q9UPR5 921 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 DNM3Q9UQ16 869 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 CCL26Q9Y258 94 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 TNRC6BQ9UPQ9 1833 aaKnown RBP14.19□□□□□ -0.14
HDAC3-213ENST00000492506 ITPR1Q14643 2758 aa14.19□□□□□ -0.14
HDAC3-213ENST00000492506 PP2D1A8MPX8 630 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 CLDN3O15551 220 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 ATG13O75143 517 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 RNF40O75150 1001 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 ADRB2P07550 413 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 CLTAP09496 248 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 GUCY2CP25092 1073 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 LILRA4P59901 499 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 GRSF1Q12849 480 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC3-213ENST00000492506 STRN3Q13033 797 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 CUL4AQ13619 759 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 RUNX3Q13761 415 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC3-213ENST00000492506 IL17AQ16552 155 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 TRIM68Q6AZZ1 485 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 DSTYKQ6XUX3 929 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 EZH1Q92800 747 aaPredicted RBP14.18□□□□□ -0.14
HDAC3-213ENST00000492506 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 THG1LQ9NWX6 298 aaKnown RBP14.18□□□□□ -0.14
HDAC3-213ENST00000492506 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
HDAC3-213ENST00000492506 PI4KAP42356 2102 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 LACTBL1A8MY62 500 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 DCLK1O15075 740 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 CDC25AP30304 524 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 CDC25CP30307 473 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 NOVA1P51513 510 aaKnown RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 CDR1P51861 262 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 PTPAQ15257 358 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 ENOX2Q16206 610 aaKnown RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 NAIF1Q69YI7 327 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 CMTM8Q8IZV2 173 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 USP13Q92995 863 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-213ENST00000492506 SENP8Q96LD8 212 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 HHIPQ96QV1 700 aa14.17□□□□□ -0.14
HDAC3-213ENST00000492506 MYCBPQ99417 103 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms