RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 APOL6Q9BWW8 343 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 TMEM117Q9H0C3 514 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
CDHR3-213ENST00000488386 CAPN10Q9HC96 672 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 PCDHA12Q9UN75 941 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 RWDD3Q9Y3V2 267 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 HES2Q9Y543 173 aa6.56□□□□□ -1.36
CDHR3-213ENST00000488386 C5orf42Q9H799 3197 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 A0A0U1RQF3 1178 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TNFRSF10CO14798 259 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 RGS13O14921 159 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 B4GALT5O43286 388 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ZC3H11AO75152 810 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 POMCP01189 267 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 MYBP10242 640 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 SFPQP23246 707 aaKnown RBP eCLIP6.55□□□□□ -1.366e-7■■□□□ 12.2
CDHR3-213ENST00000488386 GLRA2P23416 452 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 SP100P23497 879 aaPredicted RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 RARRES1P49788 294 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 NDUFV1P49821 464 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TOB1P50616 345 aaPredicted RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TNK2Q07912 1038 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 GNL2Q13823 731 aaKnown RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 CAPSQ13938 189 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 SAFBQ15424 915 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TTC38Q5R3I4 469 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ODR4Q5SWX8 454 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 UBXN11Q5T124 520 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 KCNT2Q6UVM3 1135 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 CATSPER3Q86XQ3 398 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ZNF280BQ86YH2 543 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 LRRC43Q8N309 656 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 PSPC1Q8WXF1 523 aaKnown RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 P2RX5Q93086 422 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 KREMEN1Q96MU8 473 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 NAP1L4Q99733 375 aaKnown RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 HSD17B14Q9BPX1 270 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 EIF2AQ9BY44 585 aaKnown RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 LMAN2LQ9H0V9 348 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 POLR3FQ9H1D9 316 aaPredicted RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ZSWIM4Q9H7M6 989 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 NRDE2Q9H7Z3 1164 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ENTPD7Q9NQZ7 604 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 TLR9Q9NR96 1032 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 AGPAT5Q9NUQ2 364 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 CLEC1BQ9P126 229 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 CACNG4Q9UBN1 327 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 DNAJB4Q9UDY4 337 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 PCDHB6Q9Y5E3 794 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 ST14Q9Y5Y6 855 aa6.55□□□□□ -1.36
CDHR3-213ENST00000488386 F8W810 466 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 MBTPS2O43462 519 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 TSPAN1O60635 241 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 DKC1O60832 514 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 OFD1O75665 1012 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 DDHD2O94830 711 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 EDN1P05305 212 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 SSBP05455 408 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 WEE2P0C1S8 567 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 OR52Z1P0C646 297 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 LAG3P18627 525 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CDC25AP30304 524 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 HOXA11P31270 313 aaPredicted RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 GBP1P32455 592 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 ARL2P36404 184 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 BCAR1P56945 870 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 ADAM15Q13444 863 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 COL9A2Q14055 689 aaPredicted RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 IL17AQ16552 155 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 MCTP1Q6DN14 999 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 OTUD6AQ7L8S5 288 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 ZNF410Q86VK4 478 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 NOSTRINQ8IVI9 506 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 SLC39A11Q8N1S5 342 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 C4orf32Q8N8J7 132 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 DTWD2Q8NBA8 298 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 MRPS27Q92552 414 aaKnown RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 SHDQ96IW2 340 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 ZSCAN31Q96LW9 406 aaPredicted RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 HSPA12BQ96MM6 686 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CCDC43Q96MW1 224 aaKnown RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 PLIN2Q99541 437 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 LLPHQ9BRT6 129 aaKnown RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 INO80BQ9C086 356 aaPredicted RBP6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CXCL16Q9H2A7 254 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 TLE6Q9H808 572 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms