RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 RTN1Q16799 776 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 TXNDC8Q6A555 127 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 ZNF574Q6ZN55 896 aaPredicted RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 TMPRSS12Q86WS5 348 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 C4orf19Q8IY42 314 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 OSCP1Q8WVF1 389 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 ATP2A3Q93084 1043 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 LXNQ9BS40 222 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 ZDHHC5Q9C0B5 715 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 SUSD2Q9UGT4 822 aa13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 FNDC3AQ9Y2H6 1198 aaKnown RBP13.31□□□□□ -0.28
ATPAF1-205ENST00000487193 ESYT2A0FGR8 921 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 TNFSF14O43557 240 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 MYF5P13349 255 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 OPRD1P41143 372 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 MTF1Q14872 753 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 EML3Q32P44 896 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 EOGTQ5NDL2 527 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 ETNPPLQ8TBG4 499 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 DYDC2Q96IM9 177 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 PRIMPOLQ96LW4 560 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 POLR3FQ9H1D9 316 aaPredicted RBP13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 LINC00597Q9H2U6 94 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 CYP8B1Q9UNU6 501 aa13.3□□□□□ -0.28
ATPAF1-205ENST00000487193 UBR5O95071 2799 aaPredicted RBP13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 IGHV1OR15-9A0A0B4J2B8 117 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 MTMR11A4FU01 709 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 FLRT2O43155 660 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 ADAM23O75077 832 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 NDUFS2O75306 463 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 MATKP42679 507 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 GPR17Q13304 367 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 HLA-BQ31612 363 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 C6orf132Q5T0Z8 1188 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 TTC9Q92623 222 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 ERLEC1Q96DZ1 483 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 ACAP3Q96P50 834 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 LGMNQ99538 433 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 SEPT5Q99719 369 aaPredicted RBP13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 CALCOCO1Q9P1Z2 691 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
ATPAF1-205ENST00000487193 BRINP1O60477 761 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 CER1O95813 267 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 ZNF883P0CG24 379 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 GABRG2P18507 467 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 HNF1BP35680 557 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 SLC6A11P48066 632 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 TMPRSS3P57727 454 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 OSTNP61366 133 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 TARDBPQ13148 414 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 VEPH1Q14D04 833 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 PTPRNQ16849 979 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 WDR45BQ5MNZ6 344 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 BROXQ5VW32 411 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 DBX2Q6ZNG2 339 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 ZBTB8OSQ8IWT0 167 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 ZNF419Q96HQ0 510 aaPredicted RBP13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 MIR1-1HGQ9H1L0 117 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 GMIPQ9P107 970 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
ATPAF1-205ENST00000487193 RELNP78509 3460 aa13.27□□□□□ -0.28
ATPAF1-205ENST00000487193 MYLKQ15746 1914 aa13.27□□□□□ -0.28
ATPAF1-205ENST00000487193 A0A1B0GTW7 788 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 EDN1P05305 212 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 CDC27P30260 824 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 RPL9P32969 192 aaKnown RBP13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 ACTN2P35609 894 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 YARSP54577 528 aaKnown RBP13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 RTP5Q14D33 572 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 SUZ12Q15022 739 aaKnown RBP13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 FAM187BQ17R55 369 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 MGAT5BQ3V5L5 792 aa13.27□□□□□ -0.29
ATPAF1-205ENST00000487193 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms