RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ZNF518BQ9C0D4 1074 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 NEUROG2Q9H2A3 272 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 AGO3Q9H9G7 860 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 CYP3A43Q9HB55 503 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 MRPL47Q9HD33 250 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 PARP2Q9UGN5 583 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 HPCAL4Q9UM19 191 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 AGPSO00116 658 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 PIK3R2O00459 728 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 PTGESO14684 152 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 PFKMP08237 780 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TNFRSF8P28908 595 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 AXLP30530 894 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 CDR1P51861 262 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 NKX3-2P78367 333 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 XKR4Q5GH76 650 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TWF2Q6IBS0 349 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 SERINC5Q86VE9 423 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ARFGAP1Q8N6T3 406 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 GSTCDQ8NEC7 633 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 KLHDC9Q8NEP7 349 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 RIN2Q8WYP3 895 aaPredicted RBP9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 KLHL11Q9NVR0 708 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 ST3GAL5Q9UNP4 418 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 DERAQ9Y315 318 aa9.36□□□□□ -0.91
CDC42SE1-204ENST00000483763 TULP2O00295 520 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 PIRO00625 290 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 DAPK3O43293 454 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 LMO2P25791 158 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 FLT3P36888 993 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SLC1A1P43005 524 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 KCNJ1P48048 391 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 YWHAEP62258 255 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 MRPS6P82932 125 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 ADCY2Q08462 1091 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 MYO1EQ12965 1108 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 MAP9Q49MG5 647 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 FBXO46Q6PJ61 603 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 ACOT1Q86TX2 421 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 EMC1Q8N766 993 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 RUBCNQ92622 972 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 ACSF2Q96CM8 615 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 PIWIL1Q96J94 861 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRIM31Q9BZY9 425 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 M0QYV0 167 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 KPNA6O60684 536 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 GABBR2O75899 941 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 HMGCRP04035 888 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 CALB1P05937 261 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 FGFR1P11362 822 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 P4HA1P13674 534 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 GJC1P36383 396 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 EPHB4P54760 987 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 GYS2P54840 703 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 CNGA2Q16280 664 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 PPP1R26Q5T8A7 1209 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SEL1L2Q5TEA6 688 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 DNAJC24Q6P3W2 148 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 XYLT1Q86Y38 959 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 C3orf20Q8ND61 904 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 KBTBD7Q8WVZ9 684 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 ATG4AQ8WYN0 398 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SEC14L1Q92503 715 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 NAP1L3Q99457 506 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 HEMGNQ9BXL5 484 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 FAM49BQ9NUQ9 324 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 TSPAN16Q9UKR8 245 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 SCINQ9Y6U3 715 aa9.35□□□□□ -0.91
CDC42SE1-204ENST00000483763 FSCN2O14926 492 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 POLR3GO15318 223 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 MED7O43513 233 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 SYF2O95926 243 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 VDRP11473 427 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 KCNE1P15382 129 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PTGIRP43119 386 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 SSR1P43307 286 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PSMC1P62191 440 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 DR1Q01658 176 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 PDCLQ13371 301 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 CCDC142Q17RM4 750 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
CDC42SE1-204ENST00000483763 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms