RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 SNX13Q9Y5W8 968 aa4.84□□□□□ -1.63
SMARCA1-204ENST00000478420 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 TMEM191CA6NGB0 347 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 FOXN3O00409 490 aaPredicted RBP4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 APAF1O14727 1248 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 PLIN1O60240 522 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 HKR1P10072 659 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 CD6P30203 668 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 AVPR1BP47901 424 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 PXNP49023 591 aaPredicted RBP4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 WNT3P56703 355 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 LOXL3P58215 753 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 TAP1Q03518 808 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 TMEM108Q6UXF1 575 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 VRK3Q8IV63 474 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 CCDC146Q8IYE0 955 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 ULK2Q8IYT8 1036 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 LNX2Q8N448 690 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 SSH3Q8TE77 659 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 MAML1Q92585 1016 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 PHKBQ93100 1093 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 Q96MF0 132 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 OSBPL9Q96SU4 736 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 ZSCAN32Q9NX65 697 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 SHOC2Q9UQ13 582 aa4.83□□□□□ -1.64
SMARCA1-204ENST00000478420 ANO9A1A5B4 782 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 RHPN2P1A8MT19 583 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 DCLK1O15075 740 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 PMM2O15305 246 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 FSHBP01225 129 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SRGNP10124 158 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 ZNF134P52741 427 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 LILRA4P59901 499 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 PICALMQ13492 652 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SF3B3Q15393 1217 aaKnown RBP4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 C3orf38Q5JPI3 329 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 RBM20Q5T481 1227 aaKnown RBP4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SESTD1Q86VW0 696 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 MICU3Q86XE3 530 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 SLC30A5Q8TAD4 765 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 CAVIN3Q969G5 261 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 MSLNLQ96KJ4 702 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 COQ10AQ96MF6 247 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 NELL2Q99435 816 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 PRRX2Q99811 253 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 AIFM2Q9BRQ8 373 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 POLR3GLQ9BT43 218 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 KCTD5Q9NXV2 234 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 COL20A1Q9P218 1284 aa4.82□□□□□ -1.64
SMARCA1-204ENST00000478420 MBD3L4A6NDZ8 208 aaPredicted RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 MBD3L3A6NE82 208 aaPredicted RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 TMEM233B4DJY2 109 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 PYCARD-AS1I3L0S3 204 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 PEX1O43933 1283 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 SLC5A1P13866 664 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 PPP3CBP16298 524 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 TGM1P22735 817 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 LRPAP1P30533 357 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 ACVRL1P37023 503 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 KRT17Q04695 432 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 ITIH3Q06033 890 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 IFIT5Q13325 482 aaKnown RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 MGAT5BQ3V5L5 792 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 MAP9Q49MG5 647 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 Q6YL49 198 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 GAS2L3Q86XJ1 694 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 SLC44A3Q8N4M1 653 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 TOR1AIP2Q8NFQ8 470 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 RAPGEF4Q8WZA2 1011 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 SPSB4Q96A44 273 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 STRBPQ96SI9 672 aaKnown RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 MESP1Q9BRJ9 268 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 PTDSS2Q9BVG9 487 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 STK31Q9BXU1 1019 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 TPSD1Q9BZJ3 242 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 UNKQ9C0B0 810 aaKnown RBP4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 PNPLA8Q9NP80 782 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 CORO2BQ9UQ03 480 aa4.81□□□□□ -1.64
SMARCA1-204ENST00000478420 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 MAST3O60307 1309 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 CYR61O00622 381 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 YY2O15391 372 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 RASSF9O75901 435 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 KLRC1P26715 233 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 PPIFP30405 207 aaKnown RBP4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 NXPH1P58417 271 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 FHL2Q14192 279 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 PLA1AQ53H76 456 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 ICE2Q659A1 982 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms