RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	SF3B3	Q15393	1217 aa	Known RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	LONRF1	Q17RB8	773 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	RBM20	Q5T481	1227 aa	Known RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	SP5	Q6BEB4	398 aa	Predicted RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	DBX2	Q6ZNG2	339 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	MICU3	Q86XE3	530 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	LIX1L	Q8IVB5	337 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447		Q8N1X5	172 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	OR56A3	Q8NH54	315 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PARD3B	Q8TEW8	1205 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	NEU4	Q8WWR8	484 aa	Predicted RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PHKB	Q93100	1093 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PTCD3	Q96EY7	689 aa	Known RBP	4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	TBCB	Q99426	244 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	STK31	Q9BXU1	1019 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PNPLA8	Q9NP80	782 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	CASS4	Q9NQ75	786 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	COL20A1	Q9P218	1284 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	SHOC2	Q9UQ13	582 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	HS3ST3A1	Q9Y663	406 aa		4.09	□□□□□ -1.75
TARDBP-208	ENST00000477447	PIPSL	A2A3N6	862 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	MBD3L3	A6NE82	208 aa	Predicted RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447		F8W8V4	182 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	PYCARD-AS1	I3L0S3	204 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	TRIAP1	O43715	76 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	FZD7	O75084	574 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	RASSF9	O75901	435 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	XRCC6	P12956	609 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	PPP3CB	P16298	524 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	RPL17	P18621	184 aa	Known RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	KLRC1	P26715	233 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZEB1	P37275	1124 aa	Predicted RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	PIK3CB	P42338	1070 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	PRIM2	P49643	509 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	WNT3	P56703	355 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZXDA	P98168	799 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	IFIT5	Q13325	482 aa	Known RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	PLA1A	Q53H76	456 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	ARHGAP40	Q5TG30	622 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	ABHD17B	Q5VST6	288 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	SPATA31A3	Q5VYP0	1347 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	SLC44A3	Q8N4M1	653 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	B3GALNT2	Q8NCR0	500 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	TOR1AIP2	Q8NFQ8	470 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	SLC30A5	Q8TAD4	765 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	LPIN2	Q92539	896 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447		Q96MF0	132 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	NAA15	Q9BXJ9	866 aa	Known RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	TPSD1	Q9BZJ3	242 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	A1CF	Q9NQ94	594 aa	Known RBP	4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	HDAC9	Q9UKV0	1011 aa		4.08	□□□□□ -1.76
TARDBP-208	ENST00000477447	POM121B	A6NF01	834 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	FOXN3	O00409	490 aa	Predicted RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	PARP1	P09874	1014 aa	Known RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	EGR2	P11161	476 aa	Predicted RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	CYP2C9	P11712	490 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	CASP5	P51878	434 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	DAG1	Q14118	895 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	SYCP2L	Q5T4T6	812 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	VPS53	Q5VIR6	699 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	USP51	Q70EK9	711 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	GAS2L3	Q86XJ1	694 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZNF280B	Q86YH2	543 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	VRK3	Q8IV63	474 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	CCDC33	Q8N5R6	958 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	MYCBPAP	Q8TBZ2	947 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	LARP4B	Q92615	738 aa	Known RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	SPSB4	Q96A44	273 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	FUBP1	Q96AE4	644 aa	Known RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	MSLNL	Q96KJ4	702 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	OSBPL9	Q96SU4	736 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	AIFM2	Q9BRQ8	373 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	ACTRT3	Q9BYD9	372 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	UNK	Q9C0B0	810 aa	Known RBP	4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	CYP4F11	Q9HBI6	524 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	CHST12	Q9NRB3	414 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZSCAN32	Q9NX65	697 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	KCTD5	Q9NXV2	234 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	ITGB1BP2	Q9UKP3	347 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	PHTF1	Q9UMS5	762 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	DMTF1	Q9Y222	760 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	TBC1D30	Q9Y2I9	924 aa		4.07	□□□□□ -1.76
TARDBP-208	ENST00000477447	hCG_1984214	I3L0E3	225 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	IL18RAP	O95256	599 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	IFIT2	P09913	472 aa	Known RBP	4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	IL1R1	P14778	569 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	STT3A	P46977	705 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	AVPR1B	P47901	424 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	CARS	P49589	748 aa	Known RBP	4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	BLOC1S1	P78537	153 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZNF543	Q08ER8	600 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	MYO1E	Q12965	1108 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	EIF2B5	Q13144	721 aa	Known RBP	4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZIK1	Q3SY52	487 aa	Predicted RBP	4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	MGAT5B	Q3V5L5	792 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	KLHDC7A	Q5VTJ3	777 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	CACHD1	Q5VU97	1274 aa		4.06	□□□□□ -1.76
TARDBP-208	ENST00000477447	ZDHHC24	Q6UX98	284 aa		4.06	□□□□□ -1.76

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