RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KPNB1Q14974 876 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 HIF1AQ16665 826 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 LRRC6Q86X45 466 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 BANPQ8N9N5 519 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 PAFAH2Q99487 392 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 C10orf88Q9H8K7 445 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 SGK1O00141 431 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 AHCYL1O43865 530 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ITGAVP06756 1048 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 TNNI1P19237 187 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 VHLP40337 213 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ENPEPQ07075 957 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ZC3H12AQ5D1E8 599 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SNX30Q5VWJ9 437 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SCARA3Q6AZY7 606 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 FBXO6Q9NRD1 293 aaPredicted RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 MYH9P35579 1960 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR64B1ANS9 1081 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 MMP8P22894 467 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 CDKN2BP42772 138 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 JAK3P52333 1124 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 NLRP11P59045 1033 aaKnown RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 MTM1Q13496 603 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 PSMD6Q15008 389 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 RINLQ6ZS11 566 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SLC35B2Q8TB61 432 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 DCAKDQ8WVC6 231 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 CPT1BQ92523 772 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 BICD1Q96G01 975 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SH3GL3Q99963 347 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 VPS11Q9H270 941 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 ACSS3Q9H6R3 686 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 FETUBQ9UGM5 382 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
PDZRN3-205ENST00000466780 TCRBV5S1A1TA0A578 114 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 EXTL3O43909 919 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNF862O60290 1169 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 SERPINB3P29508 390 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 GDF10P55107 478 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 GNPTABQ3T906 1256 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 IRGCQ6NXR0 463 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 PYROXD1Q8WU10 500 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 NSL1Q96IY1 281 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 TM9SF1O15321 606 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 STBD1O95210 358 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 PTPN7P35236 360 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 RFC5P40937 340 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 ACOT2P49753 483 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 PGM5Q15124 567 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 SEPT7Q16181 437 aaKnown RBP13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 CCDC6Q16204 474 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 C3orf62Q6ZUJ4 267 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 TEKT4Q8WW24 435 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 CEP170P1Q96L14 293 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 MCEEQ96PE7 176 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 FNBP1Q96RU3 617 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 TSC22D3Q99576 134 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 XPNPEP1Q9NQW7 623 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 DLGAP2Q9P1A6 1054 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
PDZRN3-205ENST00000466780 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 GYG2O15488 501 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 DNAJC6O75061 913 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 TBX10O75333 385 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 ARFIP2P53365 341 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 OCRLQ01968 901 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 GHRHRQ02643 423 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 RHPN2Q8IUC4 686 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 TAB3Q8N5C8 712 aaPredicted RBP13.64□□□□□ -0.23
PDZRN3-205ENST00000466780 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms