RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 NOC3LQ8WTT2 800 aaKnown RBP7.48□□□□□ -1.21
CLDN4-204ENST00000466411 TMEM169Q96HH4 297 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 ANKRD36BP1Q96IX9 119 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 ZNF560Q96MR9 790 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 CEP63Q96MT8 703 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 FNBP1Q96RU3 617 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 SCNM1Q9BWG6 230 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 COLEC11Q9BWP8 271 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 EIF2AQ9BY44 585 aaKnown RBP7.48□□□□□ -1.21
CLDN4-204ENST00000466411 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 IL21Q9HBE4 155 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 METTL14Q9HCE5 456 aaKnown RBP7.48□□□□□ -1.21
CLDN4-204ENST00000466411 PRM3Q9NNZ6 103 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 ENTPD7Q9NQZ7 604 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 TBC1D13Q9NVG8 400 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 DZANK1Q9NVP4 752 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 ANO10Q9NW15 660 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 SNTG2Q9NY99 539 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 RBAKQ9NYW8 714 aaPredicted RBP7.48□□□□□ -1.21
CLDN4-204ENST00000466411 SPG21Q9NZD8 308 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 HSPBP1Q9NZL4 362 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 MAP10Q9P2G4 905 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 DPP7Q9UHL4 492 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 IRAK3Q9Y616 596 aa7.48□□□□□ -1.21
CLDN4-204ENST00000466411 SF3B1O75533 1304 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLDN4-204ENST00000466411 TTC26A0AVF1 554 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 FAM189A1O60320 539 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 FOXD2O60548 495 aaPredicted RBP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 ZC3H11AO75152 810 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 PAPLNO95428 1278 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 TNNC2P02585 160 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 NR3C1P04150 777 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 TMEM191BP0C7N4 346 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 FGFR1P11362 822 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 HARSP12081 509 aaKnown RBP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 RFX1P22670 979 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 NR2F2P24468 414 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 CCNE1P24864 410 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 MAGEA9P43362 315 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 MMP16P51512 607 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 DSC1Q08554 894 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 CETN1Q12798 172 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 TMEM132DQ14C87 1099 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 CAMK4Q16566 473 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 STX1AQ16623 288 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 STPG1Q5TH74 334 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 EEF1DP3Q658K8 133 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 CENPPQ6IPU0 288 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 C19orf48Q6RUI8 117 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 KCNT2Q6UVM3 1135 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 ALKAL1Q6UXT8 129 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 TMC7Q7Z402 723 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 CCDC150Q8NCX0 1101 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 ANKRD20A12PQ8NF67 263 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 SPATA18Q8TC71 538 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 PPP1R10Q96QC0 940 aaKnown RBP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 MYADMQ96S97 322 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 GAD1Q99259 594 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 RPP25Q9BUL9 199 aaKnown RBP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 IMPG2Q9BZV3 1241 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 KCTD10Q9H3F6 313 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 FAM124BQ9H5Z6 455 aaPredicted RBP7.47□□□□□ -1.21
CLDN4-204ENST00000466411 POLD4Q9HCU8 107 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 RWDD2AQ9UIY3 292 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 ITGA11Q9UKX5 1188 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 DSEQ9UL01 958 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 INPP5FQ9Y2H2 1132 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 GDAQ9Y2T3 454 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 PTPN13Q12923 2485 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 TRIP11Q15643 1979 aa7.47□□□□□ -1.21
CLDN4-204ENST00000466411 APC2O95996 2303 aa7.46□□□□□ -1.21
CLDN4-204ENST00000466411 CFAP46Q8IYW2 2715 aa7.46□□□□□ -1.21
CLDN4-204ENST00000466411 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 FAM170BA6NMN3 283 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 TGFB1I1O43294 461 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 EDN1P05305 212 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 TPM2P07951 284 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 CCDC192P0DO97 292 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 CXCL8P10145 99 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 P4HA1P13674 534 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 AKAP5P24588 427 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 CASP1P29466 404 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ADSSP30520 456 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 GTF2H1P32780 548 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 PRCPP42785 496 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 RPS9P46781 194 aaKnown RBP7.46□□□□□ -1.22
CLDN4-204ENST00000466411 SCNN1GP51170 649 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 BCAR1P56945 870 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 NLRP12P59046 1061 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 TPM4P67936 248 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 GPC5P78333 572 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 FOXC1Q12948 553 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 MYO1EQ12965 1108 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 ADAM9Q13443 819 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 HTR4Q13639 388 aa7.46□□□□□ -1.22
CLDN4-204ENST00000466411 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms