RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 LRRC63Q05C16 580 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 MAPRE1Q15691 268 aaKnown RBP20.2■□□□□ 0.82
CHKB-204ENST00000465842 CAMK4Q16566 473 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 SGSM1Q2NKQ1 1148 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 ANKRD40Q6AI12 368 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 HFE2Q6ZVN8 426 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 LIMS2Q7Z4I7 341 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 SUGP1Q8IWZ8 645 aaKnown RBP20.2■□□□□ 0.82
CHKB-204ENST00000465842 SLC44A3Q8N4M1 653 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 CCDC150Q8NCX0 1101 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 PSMG2Q969U7 264 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 DHTKD1Q96HY7 919 aaPredicted RBP20.2■□□□□ 0.82
CHKB-204ENST00000465842 GCNAQ96QF7 691 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 KXD1Q9BQD3 176 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 MKNK1Q9BUB5 465 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 ABCB6Q9NP58 842 aa20.2■□□□□ 0.82
CHKB-204ENST00000465842 A0A1W2PRU2 124 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 MYBPHLA2RUH7 354 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 TRIM49BA6NDI0 452 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 A8MXQ7 604 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 NARSO43776 548 aaKnown RBP20.19■□□□□ 0.82
CHKB-204ENST00000465842 STX10O60499 249 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 MICAL2O94851 1124 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 FGF19O95750 216 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 HLA-DRAP01903 254 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 ATF6P18850 670 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 CCNE1P24864 410 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 CYP2F1P24903 491 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 EPHA5P54756 1037 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 RPL10AP62906 217 aaKnown RBP20.19■□□□□ 0.82
CHKB-204ENST00000465842 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 ENPEPQ07075 957 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 TEAD2Q15562 447 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 CCDC142Q17RM4 750 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 TCERG1LQ5VWI1 586 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 SCN4BQ8IWT1 228 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 GPR152Q8TDT2 470 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 TAF4BQ92750 862 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 FGF14Q92915 247 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 ELMO3Q96BJ8 720 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 MFSD1Q9H3U5 465 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 SMYD3Q9H7B4 428 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 VRTNQ9H8Y1 702 aa20.19■□□□□ 0.82
CHKB-204ENST00000465842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.821e-12■■■■■ 70.5
CHKB-204ENST00000465842 MAGEC2Q9UBF1 373 aaPredicted RBP20.19■□□□□ 0.82
CHKB-204ENST00000465842 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
CHKB-204ENST00000465842 CFHP08603 1231 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 FAM163BP0C2L3 166 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 COL9A1P20849 921 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 GABRR2P28476 465 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 RAP1GAPP47736 663 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 PMS1P54277 932 aaKnown RBP20.18■□□□□ 0.82
CHKB-204ENST00000465842 ARHGAP15Q53QZ3 475 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 DCAF17Q5H9S7 520 aaPredicted RBP20.18■□□□□ 0.82
CHKB-204ENST00000465842 MDH1BQ5I0G3 518 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 TMC8Q8IU68 726 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 SHKBP1Q8TBC3 707 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 MYLPFQ96A32 169 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 ASIC4Q96FT7 647 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 FUBP3Q96I24 572 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHKB-204ENST00000465842 PKMYT1Q99640 499 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 ATXN3LQ9H3M9 355 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 TMEM8AQ9HCN3 771 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 MAGED2Q9UNF1 606 aaPredicted RBP20.18■□□□□ 0.82
CHKB-204ENST00000465842 CTNND2Q9UQB3 1225 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 HCN4Q9Y3Q4 1203 aa20.18■□□□□ 0.82
CHKB-204ENST00000465842 DOCK6Q96HP0 2047 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 SRFP11831 508 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 CD44P16070 742 aaKnown RBP20.17■□□□□ 0.82
CHKB-204ENST00000465842 RFX1P22670 979 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 GPR15P49685 360 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 CDH8P55286 799 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 PPP3CAQ08209 521 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 MORC3Q14149 939 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 DDR2Q16832 855 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 SDHAF4Q5VUM1 108 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 LRRC3Q9BY71 257 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 GPR88Q9GZN0 384 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 ZNF334Q9HCZ1 680 aaPredicted RBP20.17■□□□□ 0.82
CHKB-204ENST00000465842 CRTAC1Q9NQ79 661 aa20.17■□□□□ 0.82
CHKB-204ENST00000465842 NOTCH4Q99466 2003 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 BICDL2A1A5D9 508 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 ASS1P00966 412 aaKnown RBP20.16■□□□□ 0.82
CHKB-204ENST00000465842 CSH1P0DML2 217 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 CSH2P0DML3 217 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
CHKB-204ENST00000465842 CDC25CP30307 473 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 GTF2H1P32780 548 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 MXI1P50539 228 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 CFAP221Q4G0U5 840 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 FAM78AQ5JUQ0 283 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 KRT39Q6A163 491 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 SPOPLQ6IQ16 392 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 FAM171BQ6P995 826 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 BMP8AQ7Z5Y6 402 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 FBXL6Q8N531 539 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 MYCBPAPQ8TBZ2 947 aa20.16■□□□□ 0.82
CHKB-204ENST00000465842 TAS1R2Q8TE23 839 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms