RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 RECQL4O94761 1208 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ECEL1O95672 775 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 KRT10P13645 584 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 AKAP5P24588 427 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 IVDP26440 423 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 HOXC8P31273 242 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 PSMC1P62191 440 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 TAP1Q03518 808 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 PIGHQ14442 188 aaPredicted RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 UBXN11Q5T124 520 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 KCTD16Q68DU8 428 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 MFSD7Q6UXD7 560 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 C12orf29Q8N999 325 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 UBA3Q8TBC4 463 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 UBLCP1Q8WVY7 318 aaPredicted RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 MAIP1Q8WWC4 291 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ART4Q93070 314 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 SLITRK1Q96PX8 696 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 MRPL45Q9BRJ2 306 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ZFYVE28Q9HCC9 887 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 STRIP2Q9ULQ0 834 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ATP8A1Q9Y2Q0 1164 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 DNAH12Q6ZR08 3092 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 HMGCRP04035 888 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 PFKMP08237 780 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 KRT3P12035 628 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 GABRB2P47870 512 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 GSCP56915 257 aaPredicted RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 INHBEP58166 350 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 KRT17Q04695 432 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 CEP85LQ5SZL2 805 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 UBAP2Q5T6F2 1119 aaKnown RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 LRRC38Q5VT99 294 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 EMC1Q8N766 993 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 FAM76AQ8TAV0 307 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 RAPGEF5Q92565 580 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 ACSF2Q96CM8 615 aaPredicted RBP10.74□□□□□ -0.69
MSH5-211ENST00000463144 MCRS1Q96EZ8 462 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 CNTN3Q9P232 1028 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 NEU2Q9Y3R4 380 aa10.74□□□□□ -0.69
MSH5-211ENST00000463144 C17orf102A2RUQ5 167 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 ERICH4A6NGS2 130 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 M0QYV0 167 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 PDCLQ13371 301 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 ZNF268Q14587 947 aaPredicted RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 PCBP1Q15365 356 aaKnown RBP eCLIP10.73□□□□□ -0.698e-7■■■■□ 25
MSH5-211ENST00000463144 CCNG2Q16589 344 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 LCLAT1Q6UWP7 414 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 DPH6Q7L8W6 267 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 RCOR2Q8IZ40 523 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 SOCS4Q8WXH5 440 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 ARHGAP39Q9C0H5 1083 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 PIN4Q9Y237 131 aaKnown RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 SNX9Q9Y5X1 595 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 PASKQ96RG2 1323 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 KRT1P04264 644 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 IL1R2P27930 398 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 AXLP30530 894 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 CRYBB1P53674 252 aaPredicted RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 YARSP54577 528 aaKnown RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 SLC25A11Q02978 314 aaKnown RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 MYO1EQ12965 1108 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 PPP1R7Q15435 360 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 C9orf57Q5W0N0 161 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 ZNF784Q8NCA9 323 aaPredicted RBP10.73□□□□□ -0.69
MSH5-211ENST00000463144 ATL2Q8NHH9 583 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 LPIN3Q9BQK8 851 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 NT5C1AQ9BXI3 368 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 LCMT1Q9UIC8 334 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 TSPAN16Q9UKR8 245 aa10.73□□□□□ -0.69
MSH5-211ENST00000463144 SMIM28A0A1B0GU29 152 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 C3orf70A6NLC5 250 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 TULP2O00295 520 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PIK3R2O00459 728 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 LRCH4O75427 683 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 AKR1A1P14550 325 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 CAPN2P17655 700 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PSMA2P25787 234 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PMS2P54278 862 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PTK6Q13882 451 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TRIP13Q15645 432 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 SOWAHAQ2M3V2 549 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 XKR4Q5GH76 650 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 KAZNQ674X7 775 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 TRNP1Q6NT89 227 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 SPOCD1Q6ZMY3 1216 aa10.72□□□□□ -0.69
MSH5-211ENST00000463144 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
MSH5-211ENST00000463144 ARRDC4Q8NCT1 418 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms