RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 WNT7BP56706 349 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 ALCAMQ13740 583 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 SLC5A9Q2M3M2 681 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 DCAF8Q5TAQ9 597 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 HHIPL2Q6UWX4 724 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 TREML1Q86YW5 311 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 APLFQ8IW19 511 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 FBXO36Q8NEA4 188 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 ZNF398Q8TD17 642 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 SERAC1Q96JX3 654 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 PCDHB2Q9Y5E7 798 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 HNRNPCL1O60812 293 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 RARBP10826 455 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 CYP24A1Q07973 514 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 LIN9Q5TKA1 542 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 SCARA3Q6AZY7 606 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 OXNAD1Q96HP4 312 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 TRAPPC9Q96Q05 1148 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 C1orf112Q9NSG2 853 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 GINM1Q9NU53 330 aa21.5■■□□□ 1.03
SMARCD2-203ENST00000448276 LPXNO60711 386 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 PYGLP06737 847 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 LMNB2Q03252 620 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 KDSRQ06136 332 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 RASA2Q15283 850 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 BBS9Q3SYG4 887 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 RASIP1Q5U651 963 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 LARGE2Q8N3Y3 721 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 DCAKDQ8WVC6 231 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 BSNDQ8WZ55 320 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 MXRA8Q9BRK3 442 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 TIPINQ9BVW5 301 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 TRPC5Q9UL62 973 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 GSTA2P09210 222 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 ADGRD1Q6QNK2 874 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 TMEM270Q6UE05 265 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 TMEM161BQ8NDZ6 487 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 EZH1Q92800 747 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 MECRQ9BV79 373 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 FBXO28Q9NVF7 368 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 SIPA1L1O43166 1804 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 LY75O60449 1722 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 PPEF1O14829 653 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 ATP2A1O14983 1001 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 NPTX2P47972 431 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 MTMR2Q13614 643 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 CUL3Q13618 768 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 CEP128Q6ZU80 1094 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 B4GALNT2Q8NHY0 566 aa21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 UBE2OQ9C0C9 1292 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-203ENST00000448276 DHX15O43143 795 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 MAPTP10636 758 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 KITP10721 976 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 VCPP55072 806 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 NCKAP1LP55160 1127 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 NOMO3P69849 1222 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 ZNF252P-AS1Q0IIN9 211 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 LRRC36Q1X8D7 754 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 XKR9Q5GH70 373 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 SPOCD1Q6ZMY3 1216 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 VPS11Q9H270 941 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 ZNF212Q9UDV6 495 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 ONECUT3O60422 494 aaPredicted RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 RTP1P59025 263 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 PRKD1Q15139 912 aaPredicted RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 OASLQ15646 514 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 CNPY1Q3B7I2 92 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 IGDCC3Q8IVU1 814 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 RBM15BQ8NDT2 890 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 COL20A1Q9P218 1284 aa21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 MARCOQ9UEW3 520 aaPredicted RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 MTO1Q9Y2Z2 717 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-203ENST00000448276 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 MT-ND3P03897 115 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PYGBP11216 843 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 ANPEPP15144 967 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 QARSP47897 775 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PSMC5P62195 406 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 GCNT1Q02742 428 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 ZRSR2Q15696 482 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 RIPOR1Q6ZS17 1223 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PALM2Q8IXS6 379 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 FEZF2Q8TBJ5 459 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 CPT1BQ92523 772 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 TRIM11Q96F44 468 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PANX3Q96QZ0 392 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 CHMP2BQ9UQN3 213 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PCDHB4Q9Y5E5 795 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 FAM155BO75949 473 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 OGDHQ02218 1023 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 MCL1Q07820 350 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 HSF5Q4G112 596 aaPredicted RBP21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 RCOR2Q8IZ40 523 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 CFAP61Q8NHU2 1237 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 THTPAQ9BU02 230 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 PPM1HQ9ULR3 514 aa21.47■■□□□ 1.03
SMARCD2-203ENST00000448276 CCDC195A0A1B0GUA6 201 aa21.46■■□□□ 1.03
SMARCD2-203ENST00000448276 HSPA1LP34931 641 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms