RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 CTNNAL1Q9UBT7 734 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 COL4A5P29400 1685 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 MAGEB2O15479 319 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PSTPIP1O43586 416 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 GAS2O43903 313 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 ICAM3P32942 547 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CHKAP35790 457 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PEX5P50542 639 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CENPCQ03188 943 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PPP2R5DQ14738 602 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 ACOT1Q86TX2 421 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 MAP7D3Q8IWC1 876 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 TMEM130Q8N3G9 435 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 RIPK2O43353 540 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CYP2B6P20813 491 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 RFC1P35251 1148 aaPredicted RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 RBP5P82980 135 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 KIAA0319LQ8IZA0 1049 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 SMC6Q96SB8 1091 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PCYT2Q99447 389 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 OSMRQ99650 979 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 ASNSD1Q9NWL6 643 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 GPATCH2LQ9NWQ4 482 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PCYOX1Q9UHG3 505 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 A6NJR5 290 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 PIAS1O75925 651 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 LCP1P13796 627 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 ELF1P32519 619 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 EIF3EP60228 445 aaKnown RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 PTPN11Q06124 597 aaPredicted RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 CCDC125Q86Z20 511 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 AP5M1Q9H0R1 490 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 TTLL3Q9Y4R7 772 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 TMEM120BA0PK00 339 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 FOXO6A8MYZ6 492 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 GOLGA8RI6L899 631 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 CAPN9O14815 690 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 IL18RAPO95256 599 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 FAM107AO95990 144 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 MAGEA4P43358 317 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 ZBTB16Q05516 673 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 PRAMEF19Q5SWL8 479 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 CRELD2Q6UXH1 353 aaPredicted RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 TRMT10CQ7L0Y3 403 aaKnown RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 PDIK1LQ8N165 341 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 C4orf33Q8N1A6 199 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 EXD1Q8NHP7 514 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 P3H4Q92791 437 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 SPATS2LQ9NUQ6 558 aaKnown RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 DPP3Q9NY33 737 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 ZBED1O96006 694 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 AGTP01019 485 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 UNGP13051 313 aaPredicted RBP12□□□□□ -0.49
CLDN4-202ENST00000431918 SDC4P31431 198 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 SPOCD1Q6ZMY3 1216 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 NME8Q8N427 588 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 PPP1R14CQ8TAE6 165 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 ACTL9Q8TC94 416 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 PIK3R5Q8WYR1 880 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 RNF34Q969K3 372 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 HAPLN2Q9GZV7 340 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 NOD1Q9Y239 953 aa12□□□□□ -0.49
CLDN4-202ENST00000431918 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 PPFIA2O75334 1257 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 RBP3P10745 1247 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 CYP2C9P11712 490 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 PHBP35232 272 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 SKOR1P84550 965 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 CAV1Q03135 178 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 FAXCQ5TGI0 409 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 VSIG1Q86XK7 387 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 C2orf69Q8N8R5 385 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 FAM71DQ8N9W8 422 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 CFAP36Q96G28 342 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 NT5C1AQ9BXI3 368 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 DDX56Q9NY93 547 aaKnown RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 CPA4Q9UI42 421 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 SPDYE5A6NIY4 337 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 M0QZ92 97 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 EZRP15311 586 aaKnown RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 TCF4P15884 667 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 NDST1P52848 882 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 GSCP56915 257 aaPredicted RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 CCHCR1Q8TD31 782 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 TFAP2BQ92481 460 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 DDX1Q92499 740 aaKnown RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 FAF2Q96CS3 445 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 KLF6Q99612 283 aaPredicted RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 DHX35Q9H5Z1 703 aaKnown RBP11.99□□□□□ -0.49
CLDN4-202ENST00000431918 MINDY3Q9H8M7 445 aa11.99□□□□□ -0.49
CLDN4-202ENST00000431918 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms