RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 PPM1LQ5SGD2 360 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 TRIM65Q6PJ69 517 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 TMC5Q6UXY8 1006 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 APTXQ7Z2E3 356 aaKnown RBP23.81■■□□□ 1.4
PTPN18-205ENST00000428843 UNC93AQ86WB7 457 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 PPM1KQ8N3J5 372 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 TTC9BQ8N6N2 239 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 SMRP1Q8NCR6 262 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 LPIN3Q9BQK8 851 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 CISHQ9NSE2 258 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 ZDHHC7Q9NXF8 308 aa23.81■■□□□ 1.4
PTPN18-205ENST00000428843 ABI2Q9NYB9 513 aaPredicted RBP23.81■■□□□ 1.4
PTPN18-205ENST00000428843 CCDC195A0A1B0GUA6 201 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 CILPO75339 1184 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 PON1P27169 355 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 ORC1Q13415 861 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 NFE2Q16621 373 aaPredicted RBP23.8■■□□□ 1.4
PTPN18-205ENST00000428843 MDH1BQ5I0G3 518 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 PHLDB3Q6NSJ2 640 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 RRAGAQ7L523 313 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 B3GALNT2Q8NCR0 500 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 CMASQ8NFW8 434 aaPredicted RBP23.8■■□□□ 1.4
PTPN18-205ENST00000428843 SPPL2BQ8TCT7 592 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 WHAMMQ8TF30 809 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 C2orf15Q8WU43 125 aaKnown RBP23.8■■□□□ 1.4
PTPN18-205ENST00000428843 KAT5Q92993 513 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 TWNKQ96RR1 684 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 SLC27A5Q9Y2P5 690 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 PCDHB5Q9Y5E4 795 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 INSL5Q9Y5Q6 135 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 C2orf16Q68DN1 1984 aa23.8■■□□□ 1.4
PTPN18-205ENST00000428843 PRUNE2Q8WUY3 3088 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 HOXA9P31269 272 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 APBA1Q02410 837 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 KCNMA1Q12791 1236 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 MAPRE1Q15691 268 aaKnown RBP23.79■■□□□ 1.4
PTPN18-205ENST00000428843 RTL10Q7L3V2 364 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 ACOT1Q86TX2 421 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.79■■□□□ 1.4
PTPN18-205ENST00000428843 MYCBPAPQ8TBZ2 947 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 MYLPFQ96A32 169 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 TNIP3Q96KP6 325 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 ADAM7Q9H2U9 754 aa23.79■■□□□ 1.4
PTPN18-205ENST00000428843 FAM124BQ9H5Z6 455 aaPredicted RBP23.79■■□□□ 1.4
PTPN18-205ENST00000428843 PTPRDP23468 1912 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 GRXCR2A6NFK2 248 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 GOLGA6L19H0YKK7 550 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 PAPLNO95428 1278 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 HNRNPA1P09651 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 YWHAEP62258 255 aaKnown RBP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 TPM4P67936 248 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 GCNT1Q02742 428 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 ITIH3Q06033 890 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 SMAD4Q13485 552 aaKnown RBP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 GJB7Q6PEY0 223 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 SPATA2LQ8IUW3 424 aaPredicted RBP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 CRYBG2Q8N1P7 616 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 TTC39CQ8N584 583 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 UBR7Q8N806 425 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 ZNF707Q96C28 371 aaPredicted RBP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 PCED1BQ96HM7 432 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 NT5C1AQ9BXI3 368 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 PRKD2Q9BZL6 878 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 ELOVL4Q9GZR5 314 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 SIX2Q9NPC8 291 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 UBE2TQ9NPD8 197 aaPredicted RBP23.78■■□□□ 1.4
PTPN18-205ENST00000428843 HSFX1Q9UBD0 423 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 CDH22Q9UJ99 828 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 YIPF1Q9Y548 306 aa23.78■■□□□ 1.4
PTPN18-205ENST00000428843 LGALS16A8MUM7 142 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 CCL16O15467 120 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 MBTPS2O43462 519 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 SOAT2O75908 522 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 HAPLN1P10915 354 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-205ENST00000428843 CYP27A1Q02318 531 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 TWF1Q12792 350 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 MGAT5BQ3V5L5 792 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 ZNF394Q53GI3 561 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 FKBP15Q5T1M5 1219 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 CES5AQ6NT32 575 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 C4orf50Q6ZRC1 276 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 GPR149Q86SP6 731 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 KREMEN1Q96MU8 473 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 SEPT5Q99719 369 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-205ENST00000428843 RHOBTB2Q9BYZ6 727 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 ABCB6Q9NP58 842 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 APEX2Q9UBZ4 518 aa23.77■■□□□ 1.4
PTPN18-205ENST00000428843 USP15Q9Y4E8 981 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-205ENST00000428843 SPTBN5Q9NRC6 3674 aaKnown RBP23.77■■□□□ 1.4
PTPN18-205ENST00000428843 LRG1P02750 347 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 CYP2F1P24903 491 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 TUFMP49411 452 aaKnown RBP23.76■■□□□ 1.39
PTPN18-205ENST00000428843 AAK1Q2M2I8 961 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 CFAP221Q4G0U5 840 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 DPY19L2P1Q6NXN4 242 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 ATXN2LQ8WWM7 1075 aaKnown RBP23.76■■□□□ 1.39
PTPN18-205ENST00000428843 SMG7Q92540 1137 aaKnown RBP23.76■■□□□ 1.39
PTPN18-205ENST00000428843 FUBP3Q96I24 572 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPN18-205ENST00000428843 B3GNT5Q9BYG0 378 aa23.76■■□□□ 1.39
PTPN18-205ENST00000428843 CLDN5O00501 218 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms