RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ZFAND2BQ8WV99 257 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 DCAKDQ8WVC6 231 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 SPOCK2Q92563 424 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 SKA1Q96BD8 255 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 CEP170P1Q96L14 293 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 CADM1Q9BY67 442 aaKnown RBP16■□□□□ 0.15
C9orf3-204ENST00000424143 VCXQ9H320 206 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
C9orf3-204ENST00000424143 PNPLA8Q9NP80 782 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.151e-7■■■■■ 232.9
C9orf3-204ENST00000424143 PXMP2Q9NR77 195 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 PKD2L1Q9P0L9 805 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 DNAJB4Q9UDY4 337 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 AGO2Q9UKV8 859 aaKnown RBP16■□□□□ 0.15
C9orf3-204ENST00000424143 ZNRF3Q9ULT6 936 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 ASB3Q9Y575 518 aa16■□□□□ 0.15
C9orf3-204ENST00000424143 IQANK1A0A1B0GTG1 560 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 A0A1W2PPM1 405 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 NVLO15381 856 aaKnown RBP15.99■□□□□ 0.15
C9orf3-204ENST00000424143 PSAPP07602 524 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 KRT7P08729 469 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 GLRA2P23416 452 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 EIF4BP23588 611 aaKnown RBP15.99■□□□□ 0.15
C9orf3-204ENST00000424143 LIG4P49917 911 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 NEK3P51956 506 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 RAP1GDS1P52306 607 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 FASTKD3Q14CZ7 662 aaKnown RBP15.99■□□□□ 0.15
C9orf3-204ENST00000424143 MTDHQ86UE4 582 aaKnown RBP15.99■□□□□ 0.15
C9orf3-204ENST00000424143 VSIG10LQ86VR7 867 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF606Q8WXB4 792 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 TAAR1Q96RJ0 339 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 CYTH2Q99418 400 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 SYNCQ9H7C4 482 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 XPNPEP1Q9NQW7 623 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 STX18Q9P2W9 335 aaKnown RBP15.99■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF212Q9UDV6 495 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 STRIP2Q9ULQ0 834 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 USTQ9Y2C2 406 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
C9orf3-204ENST00000424143 C3orf70A6NLC5 250 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-204ENST00000424143 MAGEC1O60732 1142 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 ATP9AO75110 1047 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 STAM2O75886 525 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 CBX6O95503 412 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 FGFR1P11362 822 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 SKIP12755 728 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 KRT10P13645 584 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 TNNI1P19237 187 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 ETV4P43268 484 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF252P-AS1Q0IIN9 211 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 PLEKHG4Q58EX7 1191 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 DNAJC24Q6P3W2 148 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 TMEM270Q6UE05 265 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 SH2D5Q6ZV89 423 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 CPT1BQ92523 772 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 CDHR1Q96JP9 859 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 GMLQ99445 158 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 MIPEPQ99797 713 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 KIFC3Q9BVG8 833 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 KIF9Q9HAQ2 790 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 MKS1Q9NXB0 559 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
C9orf3-204ENST00000424143 TMEM150BA6NC51 233 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF862O60290 1169 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ZSCAN5DPP0CG00 497 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 CCND2P30279 289 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ARFIP2P53365 341 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 RPS6P62753 249 aaKnown RBP15.97■□□□□ 0.15
C9orf3-204ENST00000424143 SLC34A1Q06495 639 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ACAP1Q15027 740 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 PRKD1Q15139 912 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-204ENST00000424143 GSTA3Q16772 222 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 LLGL2Q6P1M3 1020 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 RAB3IL1Q8TBN0 382 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 TCP10LQ8TDR4 215 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 BICD1Q96G01 975 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 TSSK1BQ9BXA7 367 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 TMEM134Q9H6X4 195 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 CYP26B1Q9NR63 512 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 CNTNAP2Q9UHC6 1331 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 A0A0B4J269 797 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 DPPA5A6NC42 116 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 PLSCR1O15162 318 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ECM2O94769 699 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-204ENST00000424143 NEFHP12036 1026 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ADRA1DP25100 572 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 SSR1P43307 286 aaKnown RBP15.97■□□□□ 0.15
C9orf3-204ENST00000424143 NAMPTP43490 491 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 NOP14P78316 857 aaKnown RBP15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ADCY1Q08828 1119 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 AP1B1Q10567 949 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 TBCCQ15814 346 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 DBN1Q16643 649 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 XKR3Q5GH77 459 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 ZNF449Q6P9G9 518 aa15.97■□□□□ 0.15
C9orf3-204ENST00000424143 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms