RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SLC7A4O43246 635 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PLA2G6O60733 806 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CAMTA2O94983 1202 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 MTHFD1P11586 935 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 MYF5P13349 255 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 XBP1P17861 261 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 VCAM1P19320 739 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 AOAHP28039 575 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ACTN2P35609 894 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 GGT5P36269 586 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NCKAP1LP55160 1127 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 SOX8P57073 446 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ERVFC1P60507 584 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 LACTBP83111 547 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 BNIP3Q12983 259 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NOGQ13253 232 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PDE1CQ14123 709 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 POLD3Q15054 466 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 CNGA2Q16280 664 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CFAP58Q5T655 872 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CCBE1Q6UXH8 406 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 UNC5DQ6UXZ4 953 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 DNAJB7Q7Z6W7 309 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 SP8Q8IXZ3 490 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 RNF169Q8NCN4 708 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NSUN7Q8NE18 718 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 IL31RAQ8NI17 732 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 IPCEF1Q8WWN9 437 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 APIPQ96GX9 242 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 MYRFLQ96LU7 910 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 MYBBP1AQ9BQG0 1328 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 AP1M1Q9BXS5 423 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NUP98P52948 1817 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 KTN1Q86UP2 1357 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 NFIBO00712 420 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NPC1O15118 1278 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PRLP01236 227 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 SBK3P0C264 359 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 NPR1P16066 1061 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 CHRM3P20309 590 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PTPN7P35236 360 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 PLA2G5P39877 138 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 TEKQ02763 1124 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 SLC35G1Q2M3R5 365 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 FLYWCH1Q4VC44 716 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ABHD15Q6UXT9 468 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 UBE3BQ7Z3V4 1068 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ANKRD18AQ8IVF6 992 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZDHHC14Q8IZN3 488 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 ZBTB8BQ8NAP8 495 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 CPT1CQ8TCG5 803 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 SMCR8Q8TEV9 937 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 LBHD1Q9BQE6 289 aaPredicted RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 SARS2Q9NP81 518 aaKnown RBP2.89□□□□□ -1.95
MCF2-204ENST00000414978 GPR160Q9UJ42 338 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 FRMPD3Q5JV73 1810 aa2.89□□□□□ -1.95
MCF2-204ENST00000414978 COL4A5P29400 1685 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MYPNQ86TC9 1320 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 TRBV23OR9-2A0A075B6M9 112 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 AP3D1O14617 1153 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 IRAK2O43187 625 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 PSPNO60542 156 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 EFEMP2O95967 443 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CD1AP06126 327 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 RAP2AP10114 183 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 PPP3CAQ08209 521 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 IKZF1Q13422 519 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 LRRC24Q50LG9 513 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 KAZNQ674X7 775 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 FBXO46Q6PJ61 603 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 KLHL17Q6TDP4 642 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CRIPAKQ8N1N5 446 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 TTLL6Q8N841 843 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CEP70Q8NHQ1 597 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 HOXB13Q92826 284 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 ARL8AQ96BM9 186 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 COG8Q96MW5 612 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 MMP19Q99542 508 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CARS2Q9HA77 564 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 AJAP1Q9UKB5 411 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 PLAGL2Q9UPG8 496 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CAMK2AQ9UQM7 478 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 COL1A1P02452 1464 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 LTBP2Q14767 1821 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 EVC2Q86UK5 1308 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 A0A1W2PPC4 97 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 F8W031 263 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 EIF4EBP3O60516 100 aaPredicted RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 COBLO75128 1261 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 EEF1GP26641 437 aaKnown RBP2.88□□□□□ -1.95
MCF2-204ENST00000414978 HOXD13P35453 343 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 RRADP55042 308 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CD69Q07108 199 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 TARDBPQ13148 414 aaKnown RBP eCLIP2.88□□□□□ -1.95
MCF2-204ENST00000414978 ITPK1Q13572 414 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 AOC3Q16853 763 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 HLA-DQA1Q5Y7H0 255 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 CD300LDQ6UXZ3 194 aa2.88□□□□□ -1.95
MCF2-204ENST00000414978 KCTD20Q7Z5Y7 419 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms