RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SCG2P13521 617 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PTPN1P18031 435 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 STAT3P40763 770 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TXKP42681 527 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PTGIRP43119 386 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CDK17Q00537 523 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MCL1Q07820 350 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ADAM15Q13444 863 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CTTNQ14247 550 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TRPM8Q7Z2W7 1104 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PIGZQ86VD9 579 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 POTEDQ86YR6 584 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 IGDCC3Q8IVU1 814 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SLC7A5P1Q8MH63 180 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MREGQ8N565 214 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SNRNP27Q8WVK2 155 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MAML1Q92585 1016 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ERGIC2Q96RQ1 377 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 HAPLN3Q96S86 360 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NDNQ99608 321 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CLSTN3Q9BQT9 956 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MECRQ9BV79 373 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PLVAPQ9BX97 442 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 OXCT2Q9BYC2 517 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NAA50Q9GZZ1 169 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 GPRC5CQ9NQ84 441 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TLR9Q9NR96 1032 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 RHBDL2Q9NX52 303 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 AATFQ9NY61 560 aaKnown RBP eCLIP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SORCS3Q9UPU3 1222 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 GPSM3Q9Y4H4 160 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ABHD14A-ACY1A0A1B0GW23 586 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TCRBV7S3A2A0A539 114 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TMEM110-MUSTN1A8MSY1 372 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MINDY4BA8MYZ0 360 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TGFB1I1O43294 461 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PQBP1O60828 265 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 OATP04181 439 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 RFC1P35251 1148 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PLTPP55058 493 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MTMR3Q13615 1198 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ITGA7Q13683 1181 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PSMD6Q15008 389 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ANGPT1Q15389 498 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SFT2D3Q587I9 215 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CCDC181Q5TID7 509 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 APOBEC3HQ6NTF7 200 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF449Q6P9G9 518 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CAPN12Q6ZSI9 719 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MAATS1Q7Z4T9 603 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NELFCDQ8IXH7 590 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 EFHBQ8N7U6 833 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SNX31Q8N9S9 440 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 RFWD2Q8NHY2 731 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NUDT8Q8WV74 236 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 GAB3Q8WWW8 586 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PPP2R3CQ969Q6 453 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ITFG2Q969R8 447 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 GSDMAQ96QA5 445 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 UBL7Q96S82 380 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 EBF4Q9BQW3 602 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 FAM126AQ9BYI3 521 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 RUBCNLQ9H714 662 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MMRN2Q9H8L6 949 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 DNAAF2Q9NVR5 837 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ZMIZ1Q9ULJ6 1067 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 U3KPZ7 1027 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 USP9YO00507 2555 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CCDC196A0A1B0GTZ2 297 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 RBM47A0AV96 593 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ANKRD18BA2A2Z9 1011 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 GOLGA8RI6L899 631 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 KCNK3O14649 394 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF213O14771 459 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TREHO43280 583 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ZSCAN12O43309 604 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SNUPNO95149 360 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CLIC3O95833 236 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CXCL10P02778 98 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 IVLP07476 585 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TRIM21P19474 475 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 SLC8A1P32418 973 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 DPP6P42658 865 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MSH2P43246 934 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NOVP48745 357 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 C19orf57Q0VDD7 668 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 NONOQ15233 471 aaKnown RBP eCLIP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TRIP13Q15645 432 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 MAPK6Q16659 721 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 WHAMMP3Q1A5X7 153 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF423Q2M1K9 1284 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 KRT71Q3SY84 523 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PYCR3Q53H96 274 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PDE12Q6L8Q7 609 aaKnown RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 CNKSR3Q6P9H4 555 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 LRIG3Q6UXM1 1119 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 PTAR1Q7Z6K3 402 aaPredicted RBP3.32□□□□□ -1.88
RGPD3-202ENST00000409886 TRIM59Q8IWR1 403 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 KIAA2013Q8IYS2 634 aa3.32□□□□□ -1.88
RGPD3-202ENST00000409886 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms