RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ZBTB41Q5SVQ8 909 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 LPCAT4Q643R3 524 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 IRGCQ6NXR0 463 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SCARA5Q6ZMJ2 495 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 PPM1NQ8N819 430 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 FAM71DQ8N9W8 422 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 RBM15BQ8NDT2 890 aaKnown RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 MMP19Q99542 508 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 IQCGQ9H095 443 aaKnown RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM8AQ9HCN3 771 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 PPM1HQ9ULR3 514 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ASB3Q9Y575 518 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 A6NJR5 290 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 MAGEB2O15479 319 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 PRPF4O43172 522 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 PDE5AO76074 875 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CD48P09326 243 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 MUTP22033 750 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ATXN3P54252 364 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CENPCQ03188 943 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 RIPOR1Q6ZS17 1223 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 EMC1Q8N766 993 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 BBOF1Q8ND07 529 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ACTL9Q8TC94 416 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ZNF668Q96K58 619 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ZNF184Q99676 751 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TJP2Q9UDY2 1190 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 KRT34O76011 436 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 OR6B1O95007 311 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 LYNP07948 512 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 QARSP47897 775 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 RTP1P59025 263 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 TMPRSS15P98073 1019 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 OGDHQ02218 1023 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 KBTBD12Q3ZCT8 623 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 SLC39A4Q6P5W5 647 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 SYDE1Q6ZW31 735 aaPredicted RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 LDHDQ86WU2 507 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 GSTCDQ8NEC7 633 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 EZH1Q92800 747 aaPredicted RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 DNAJC1Q96KC8 554 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 STRA6Q9BX79 667 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 MOV10L1Q9BXT6 1211 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 KCNK13Q9HB14 408 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 PTPRJQ12913 1337 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 CST8O60676 142 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 ZMPSTE24O75844 475 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 RAD17O75943 681 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 PGM3O95394 542 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 HLA-DRAP01903 254 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 PTK7Q13308 1070 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 TAF5Q15542 800 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 PRPF39Q86UA1 669 aaKnown RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 RSAD2Q8WXG1 361 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 OXNAD1Q96HP4 312 aaPredicted RBP10.04□□□□□ -0.8
SMC1B-202ENST00000404354 ATRNL1Q5VV63 1379 aa10.04□□□□□ -0.8
SMC1B-202ENST00000404354 UGT1A9O60656 530 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 BBOX1O75936 387 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 BRD2P25440 801 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 GMPRP36959 345 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SLC1A1P43005 524 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CUL3Q13618 768 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 LBRQ14739 615 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 NFIL3Q16649 462 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 UNC45BQ8IWX7 931 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SLC26A7Q8TE54 656 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PTCD3Q96EY7 689 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 SLITRK1Q96PX8 696 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 GORASP1Q9BQQ3 440 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 WDR83Q9BRX9 315 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 EBF3Q9H4W6 596 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 UGT1A7Q9HAW7 530 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 UGT1A10Q9HAW8 530 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 UGT1A8Q9HAW9 530 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 CLIC5Q9NZA1 410 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 XPO7Q9UIA9 1087 aaKnown RBP10.03□□□□□ -0.8
SMC1B-202ENST00000404354 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 ALOX15BO15296 676 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM63AO94886 807 aa10.03□□□□□ -0.8
SMC1B-202ENST00000404354 ELK3P41970 407 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms