RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ALDH18A1P54886 795 aaKnown RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 GEMIN4P57678 1058 aaKnown RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 SLC34A1Q06495 639 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 LDHDQ86WU2 507 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 BBOF1Q8ND07 529 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 FNBP1Q96RU3 617 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 hCG_2014768A0A024R1R8 64 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 FCHO1O14526 889 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 MT-ND3P03897 115 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 RANBP1P43487 201 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 SLC39A4Q6P5W5 647 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.04■□□□□ -0
CLIP2-203ENST00000395060 PCSK1NQ9UHG2 260 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 LRCH1Q9Y2L9 728 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
CLIP2-203ENST00000395060 ACTL7BQ9Y614 415 aa15.04■□□□□ -0
CLIP2-203ENST00000395060 P4HA2O15460 535 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 MAGEB2O15479 319 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 TOP3BO95985 862 aaKnown RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 MUTP22033 750 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 YWHAGP61981 247 aaKnown RBP eCLIP15.03■□□□□ -0
CLIP2-203ENST00000395060 WDR44Q5JSH3 913 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 FAXCQ5TGI0 409 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 FAM136AQ96C01 138 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ACAP3Q96P50 834 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 WDR35Q9P2L0 1181 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 F5H423 210 aaPredicted RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 CYB561D2O14569 222 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 PYGLP06737 847 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ROR2Q01974 943 aaKnown RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 DMP1Q13316 513 aaPredicted RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 ZBTB41Q5SVQ8 909 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 STRIP1Q5VSL9 837 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 SCARA5Q6ZMJ2 495 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ZCCHC23Q6ZST2 131 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 CFAP36Q96G28 342 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 GMCL1Q96IK5 515 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 SERAC1Q96JX3 654 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ZBTB45Q96K62 511 aaPredicted RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 MXRA8Q9BRK3 442 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 TRIM56Q9BRZ2 755 aaKnown RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 MOV10L1Q9BXT6 1211 aaKnown RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 KRT82Q9NSB4 513 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 RABGEF1Q9UJ41 708 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 IKBKGQ9Y6K9 419 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 HLA-DRAP01903 254 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 VIL1P09327 827 aaKnown RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 GPC3P51654 580 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 CYP24A1Q07973 514 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 FAAP100Q0VG06 881 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ORC1Q13415 861 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 RASA2Q15283 850 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 MON1BQ7L1V2 547 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 ARID3BQ8IVW6 561 aaPredicted RBP15.03■□□□□ -0
CLIP2-203ENST00000395060 CCDC33Q8N5R6 958 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 SH3TC2Q8TF17 1288 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 RILPQ96NA2 401 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 SLITRK1Q96PX8 696 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 TUBGCP5Q96RT8 1024 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 OCEL1Q9H607 264 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 CCPG1Q9ULG6 757 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 PCDHB2Q9Y5E7 798 aa15.03■□□□□ -0
CLIP2-203ENST00000395060 PTPRJQ12913 1337 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 SORBS2O94875 1100 aaKnown RBP15.02■□□□□ -0
CLIP2-203ENST00000395060 TJP3O95049 919 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 SLC1A1P43005 524 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 RPS6KA3P51812 740 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 GTF2BQ00403 316 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 LAMB3Q13751 1172 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 BMPR2Q13873 1038 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 TCEAL1Q15170 157 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 IRGCQ6NXR0 463 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 IGDCC3Q8IVU1 814 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 FAM71DQ8N9W8 422 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 TMEM161BQ8NDZ6 487 aa15.02■□□□□ -0
CLIP2-203ENST00000395060 ARHGAP42A6NI28 874 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 SIGLEC16A6NMB1 481 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 PIK3R2O00459 728 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 TXNDC9O14530 226 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 NPTXRO95502 500 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 OGDHQ02218 1023 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 MTMR1Q13613 665 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 RNASEH2BQ5TBB1 312 aaKnown RBP15.02□□□□□ -0.01
CLIP2-203ENST00000395060 DPH6Q7L8W6 267 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 TREML1Q86YW5 311 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 GALNT15Q8N3T1 639 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 ALLCQ8N6M5 410 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 CEP170P1Q96L14 293 aa15.02□□□□□ -0.01
CLIP2-203ENST00000395060 WDR83Q9BRX9 315 aaKnown RBP15.02□□□□□ -0.01
CLIP2-203ENST00000395060 CD48P09326 243 aa15.01□□□□□ -0.01
CLIP2-203ENST00000395060 OTUD4Q01804 1114 aaKnown RBP15.01□□□□□ -0.01
CLIP2-203ENST00000395060 PTK7Q13308 1070 aa15.01□□□□□ -0.01
CLIP2-203ENST00000395060 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-203ENST00000395060 POU5F2Q8N7G0 328 aa15.01□□□□□ -0.01
CLIP2-203ENST00000395060 ACTL9Q8TC94 416 aa15.01□□□□□ -0.01
CLIP2-203ENST00000395060 PYDC1Q8WXC3 89 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms