RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 FAM187AA6NFU0 413 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 LPXNO60711 386 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 GJB6O95452 261 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 HMBSP08397 361 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 ARFIP2P53365 341 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 GPS1Q13098 491 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 GRIK4Q16099 956 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 BZW1Q7L1Q6 419 aaKnown RBP19.77■□□□□ 0.76
CSPG5-202ENST00000383738 AGR3Q8TD06 166 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 L3MBTL3Q96JM7 780 aaPredicted RBP19.77■□□□□ 0.76
CSPG5-202ENST00000383738 MKNK1Q9BUB5 465 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 TIPINQ9BVW5 301 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 SNCAIPQ9Y6H5 919 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 TRPM3Q9HCF6 1732 aaPredicted RBP19.77■□□□□ 0.76
CSPG5-202ENST00000383738 PDGFRAP16234 1089 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 CDH6P55285 790 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 GMLQ99445 158 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 KCNH4Q9UQ05 1017 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 ARFGEF2Q9Y6D5 1785 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 ROBO3Q96MS0 1386 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 EPHB2P29323 1055 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 PGM1P36871 562 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 KCNT1Q5JUK3 1230 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 ARHGEF19Q8IW93 802 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 SMC1BQ8NDV3 1235 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 RDM1Q8NG50 284 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 SPATA20Q8TB22 786 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 RUBCNQ92622 972 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 DDX50Q9BQ39 737 aaKnown RBP19.77■□□□□ 0.76
CSPG5-202ENST00000383738 TINF2Q9BSI4 451 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 SCINQ9Y6U3 715 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 TAF1P21675 1872 aa19.77■□□□□ 0.76
CSPG5-202ENST00000383738 CCDC78A2IDD5 438 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 NKRFO15226 690 aaKnown RBP eCLIP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 SNUPNO95149 360 aaKnown RBP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 KRT16P08779 473 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 HSPA6P17066 643 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 MAPK7Q13164 816 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 FAM81BQ96LP2 452 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 KNL1Q8NG31 2342 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 PIK3CDO00329 1044 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 B4GALT5O43286 388 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 LGALS2P05162 132 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 TGFB3P10600 412 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 PDIA2Q13087 525 aaKnown RBP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 LBX2Q6XYB7 198 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 PWWP2AQ96N64 755 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 RBM15Q96T37 977 aaKnown RBP eCLIP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 C17orf102A2RUQ5 167 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 POMCP01189 267 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 ELNP15502 786 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 MX2P20592 715 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 PHBP35232 272 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 RABGAP1LQ5R372 815 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 RNF168Q8IYW5 571 aaPredicted RBP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 BHMTQ93088 406 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 MAP3K20Q9NYL2 800 aaKnown RBP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 PCDHB2Q9Y5E7 798 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 ZBED1O96006 694 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 HNRNPCP07910 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 CPT1AP50416 773 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 ITGA8P53708 1063 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 MAP7D1Q3KQU3 841 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 DEFB128Q7Z7B8 93 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
CSPG5-202ENST00000383738 EMC1Q8N766 993 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 THTPAQ9BU02 230 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 EDEM3Q9BZQ6 932 aa19.76■□□□□ 0.75
CSPG5-202ENST00000383738 ENTPD5O75356 428 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 DHX34Q14147 1143 aaKnown RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 GPR142Q7Z601 462 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 KIAA0319LQ8IZA0 1049 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 CFAP36Q96G28 342 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 CDC42EP4Q9H3Q1 356 aaKnown RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 VAV3Q9UKW4 847 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 CEP290O15078 2479 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 CASTOR2A6NHX0 329 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 GOLGA8CPA6NN73 597 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 RTN2O75298 545 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 DRD4P21917 467 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 SEMA3FQ13275 785 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 LAMB3Q13751 1172 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 ACAT1P24752 427 aaKnown RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 THOC5Q13769 683 aaKnown RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 RYBPQ8N488 228 aaPredicted RBP19.75■□□□□ 0.75
CSPG5-202ENST00000383738 NIF3L1Q9GZT8 377 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 SMYD2Q9NRG4 433 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 WDR70Q9NW82 654 aa19.75■□□□□ 0.75
CSPG5-202ENST00000383738 MYH14Q7Z406 1995 aaKnown RBP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 MIF4GDA9UHW6 222 aaKnown RBP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 ASAP2O43150 1006 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 STRNO43815 780 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 SRGAP2BP0DMP2 458 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 OAZ1P54368 228 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 ST13P4Q8IZP2 240 aaPredicted RBP19.74■□□□□ 0.75
CSPG5-202ENST00000383738 DCLK2Q8N568 766 aa19.74■□□□□ 0.75
CSPG5-202ENST00000383738 CLEC4DQ8WXI8 215 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms