RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SERAC1Q96JX3 654 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 TTC25Q96NG3 672 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 THTPAQ9BU02 230 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 KCNH7Q9NS40 1196 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 STX18Q9P2W9 335 aaKnown RBP12.91□□□□□ -0.34
PHGDH-201ENST00000369407 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
PHGDH-201ENST00000369407 MEI4A8MW99 385 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-201ENST00000369407 STAT2P52630 851 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 RTP1P59025 263 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 CDK16Q00536 496 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 TMEM179Q6ZVK1 233 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 KATNAL2Q8IYT4 538 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SLITRK1Q96PX8 696 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 C1orf112Q9NSG2 853 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 YWHABP31946 246 aaKnown RBP12.91□□□□□ -0.34
PHGDH-201ENST00000369407 GTF2BQ00403 316 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 MCL1Q07820 350 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 CFAP157Q5JU67 520 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 SENP1Q9P0U3 644 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 PPARGC1AQ9UBK2 798 aaKnown RBP12.91□□□□□ -0.34
PHGDH-201ENST00000369407 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
PHGDH-201ENST00000369407 PSTPIP1O43586 416 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 CNPY1Q3B7I2 92 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 RIPOR1Q6ZS17 1223 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 RBM15BQ8NDT2 890 aaKnown RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 MT-ND3P03897 115 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 PSMC5P62195 406 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 ZNF394Q53GI3 561 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 C1QTNF12Q5T7M4 302 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 LIN9Q5TKA1 542 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 IGDCC3Q8IVU1 814 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 HIPK4Q8NE63 616 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-201ENST00000369407 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
PHGDH-201ENST00000369407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 RARBP10826 455 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ANPEPP15144 967 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 TNNI1P19237 187 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 NPTX2P47972 431 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 FAAP100Q0VG06 881 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 MORF4L2Q15014 288 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 CDHR3Q6ZTQ4 885 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 OGFOD1Q8N543 542 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ZFAND2BQ8WV99 257 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 BICD1Q96G01 975 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 PANX3Q96QZ0 392 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SORBS2O94875 1100 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 VIL1P09327 827 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ALDH18A1P54886 795 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 OGDHQ02218 1023 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SPOCD1Q6ZMY3 1216 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 USP6NLQ92738 828 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 CCDC97Q96F63 343 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 SHCBP1LQ9BZQ2 653 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 COA1Q9GZY4 146 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ZWILCHQ9H900 591 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 COL20A1Q9P218 1284 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
PHGDH-201ENST00000369407 AVILO75366 819 aa12.89□□□□□ -0.35
PHGDH-201ENST00000369407 BBOX1O75936 387 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms