RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TRIM17Q9Y577 477 aa14.81□□□□□ -0.04
USF1-202ENST00000368020 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 LACTBL1A8MY62 500 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 SEPT4O43236 478 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 KRT7P08729 469 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 WEE2P0C1S8 567 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 OSTNP61366 133 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 PPP2R2AP63151 447 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 CACNB2Q08289 660 aaPredicted RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 WDR72Q3MJ13 1102 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 DNAJC21Q5F1R6 531 aaKnown RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 PPP1R15BQ5SWA1 713 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 JADE1Q6IE81 842 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 C1orf127Q8N9H9 656 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 BCAS4Q8TDM0 211 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 C1orf54Q8WWF1 131 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 NLRP7Q8WX94 980 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 CCDC114Q96M63 670 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 ACAP3Q96P50 834 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 MCEEQ96PE7 176 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 PLEKHA5Q9HAU0 1116 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 DUSP11O75319 330 aaKnown RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 GJB1P08034 283 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 NFICP08651 508 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 IQCF3P0C7M6 154 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 CD19P15391 556 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 ELNP15502 786 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 ARF4P18085 180 aaPredicted RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 ATP5DP30049 168 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 RDXP35241 583 aaKnown RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 TAS2R40P59535 323 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 RBP5P82980 135 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 ZNF268Q14587 947 aaPredicted RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 GRIK4Q16099 956 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 HADHQ16836 314 aaKnown RBP14.8□□□□□ -0.04
USF1-202ENST00000368020 TMEM63BQ5T3F8 832 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 SCARA5Q6ZMJ2 495 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 B4GALNT4Q76KP1 1039 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 TRPV1Q8NER1 839 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 EPN3Q9H201 632 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 SIX4Q9UIU6 781 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
USF1-202ENST00000368020 A0A1B0GUA9 196 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 A6NJR5 290 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 EBAG9O00559 213 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 ADCY6O43306 1168 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 CILPO75339 1184 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 AGTP01019 485 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 KRT1P04264 644 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 ITGB3P05106 788 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 MMP3P08254 477 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 VDRP11473 427 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
USF1-202ENST00000368020 GRK4P32298 578 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 LSP1P33241 339 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 GRM5P41594 1212 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 KCNJ1P48048 391 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 ATP1A2P50993 1020 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 NKX3-2P78367 333 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 PTPN11Q06124 597 aaPredicted RBP14.79□□□□□ -0.04
USF1-202ENST00000368020 MYO1EQ12965 1108 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 ZNF394Q53GI3 561 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 C2CD6Q53TS8 623 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 TFDP3Q5H9I0 405 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 ZFYVE27Q5T4F4 411 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 CEP120Q8N960 986 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 OR2W6PQ8NHA6 318 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 TLCD1Q96CP7 247 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 SLITRK1Q96PX8 696 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 TSPAN18Q96SJ8 248 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 DNAI2Q9GZS0 605 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 CHST7Q9NS84 486 aa14.79□□□□□ -0.04
USF1-202ENST00000368020 RIPK2O43353 540 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 TSPAN1O60635 241 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 CAPN15O75808 1086 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 ZNF286BP0CG31 522 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 KRT3P12035 628 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 RAD23BP54727 409 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SNX16P57768 344 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 RPL7AP62424 266 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 INCA1Q0VD86 236 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 PDCLQ13371 301 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SNX1Q13596 522 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SLC29A2Q14542 456 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 GJC2Q5T442 439 aaPredicted RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 RHBDF2Q6PJF5 856 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 PHLDB2Q86SQ0 1253 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 RELL1Q8IUW5 271 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 TTC13Q8NBP0 860 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 IPO4Q8TEX9 1081 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 TFAP2BQ92481 460 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 HPDLQ96IR7 371 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SYNCQ9H7C4 482 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
USF1-202ENST00000368020 BARX2Q9UMQ3 279 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms