RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 AKAP12Q02952 1782 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 CFLARO15519 480 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ALDH1A2O94788 518 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 VDRP11473 427 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 LIG3P49916 1009 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 FBXO44Q9H4M3 255 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 RHOCP08134 193 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 PBLDP30039 288 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 KLK7P49862 253 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 WASHC5Q12768 1159 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 SNX31Q8N9S9 440 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 PTPRN2Q92932 1015 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 MKNK1Q9BUB5 465 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 SMPD4Q9NXE4 827 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 P4HA2O15460 535 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FDPSP14324 419 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 IZUMO3Q5VZ72 239 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 ARHGEF38Q9NXL2 777 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM86B1E9PN63 330 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM86B2P0C5J1 330 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 MCF2P10911 925 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 UBA1P22314 1058 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FNDC3BQ53EP0 1204 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FEZF2Q8TBJ5 459 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 SPATA18Q8TC71 538 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 ARHGEF26Q96DR7 871 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 RNF19AQ9NV58 838 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 CHD4Q14839 1912 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 ACAT1P24752 427 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 GRIN1Q05586 938 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 TTC31Q49AM3 519 aaPredicted RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 XPO7Q9UIA9 1087 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 CRLS1Q9UJA2 301 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 GAKO14976 1311 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 A0A087WUV0 522 aaPredicted RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 RASA4BC9J798 803 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 RASA4O43374 803 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 HIF1AQ16665 826 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 TSNAXIP1Q2TAA8 658 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 NIPA1Q7RTP0 329 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 HELQQ8TDG4 1101 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 CARNS1A5YM72 827 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 ZBTB41Q5SVQ8 909 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 C11orf96Q7Z7L8 435 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 SYT15Q9BQS2 421 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 IL25Q9H293 177 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 NOVA2Q9UNW9 492 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 DDX5P17844 614 aaKnown RBP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 VCLP18206 1134 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 TYK2P29597 1187 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 GALCP54803 685 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 OXCT1P55809 520 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 SESN3P58005 492 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 MYL6P60660 151 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 ZFATQ9P243 1243 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 NCKAP1Q9Y2A7 1128 aa11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
SYNPO2-201ENST00000307142 EPM2AIP1Q7L775 607 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 UNC45BQ8IWX7 931 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 GAD1Q99259 594 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 MAP10Q9P2G4 905 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM95CA0A1B0GW59 222 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 LACTBL1A8MY62 500 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 NDUFS2O75306 463 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 TKTL1P51854 596 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CYP24A1Q07973 514 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 ACAD11Q709F0 780 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 ACSF2Q96CM8 615 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 TRIM66O15016 1216 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CACUL1Q86Y37 369 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 ADCY6O43306 1168 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 HMOX2P30519 316 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CREMQ03060 361 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 CRY2Q49AN0 593 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 GLE1Q53GS7 698 aaKnown RBP11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC28A3Q9HAS3 691 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms