RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GOLGA6L10A6NI86 522 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 FSCN2O14926 492 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 PDGFRBP09619 1106 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 EIF4BP23588 611 aaKnown RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 YARSP54577 528 aaKnown RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 CDO1Q16878 200 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 SLC27A1Q6PCB7 646 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 GSTA5Q7RTV2 222 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 ZNF410Q86VK4 478 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 TAB3Q8N5C8 712 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 PWWP2AQ96N64 755 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 ZFYVE28Q9HCC9 887 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 SAE1Q9UBE0 346 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 PCYOX1Q9UHG3 505 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 MED7O43513 233 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 LSM8O95777 96 aaKnown RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 P4HA1P13674 534 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 CLUL1Q15846 466 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 RAPGEF5Q92565 580 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
CAPN1-201ENST00000279247 GRHL1Q9NZI5 618 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 GABRQQ9UN88 632 aa18.96■□□□□ 0.63
CAPN1-201ENST00000279247 PLCB3Q01970 1234 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 NFX1Q12986 1120 aaKnown RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 GNASQ5JWF2 1037 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 NOTUMQ6P988 496 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 ZDHHC24Q6UX98 284 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 C10orf88Q9H8K7 445 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 ZDHHC18Q9NUE0 388 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 LAMA2P24043 3122 aaKnown RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 GOLGA8KD6RF30 607 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 TULP2O00295 520 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 DARSP14868 501 aaKnown RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 FAM102AQ5T9C2 384 aaPredicted RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 CXCL17Q6UXB2 119 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 OR6B3Q8NGW1 331 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 PIWIL1Q96J94 861 aaKnown RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 SH3GL2Q99962 352 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 GRM5P41594 1212 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 TRIM32Q13049 653 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 SNX17Q15036 470 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 FSCN1Q16658 493 aaKnown RBP18.95■□□□□ 0.62
CAPN1-201ENST00000279247 KRT71Q3SY84 523 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 MREGQ8N565 214 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 GJD2Q9UKL4 321 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 TSPAN16Q9UKR8 245 aa18.95■□□□□ 0.62
CAPN1-201ENST00000279247 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-201ENST00000279247 ADCY8P40145 1251 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 RGS2P41220 211 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 MYO1EQ12965 1108 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 CALCOCO2Q13137 446 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 OR6B2Q6IFH4 312 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 SEMA4AQ9H3S1 761 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 PSTPIP1O43586 416 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 SHBGP04278 402 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 RAB6CQ53S08 254 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 SH3PXD2AQ5TCZ1 1133 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 TWF2Q6IBS0 349 aaKnown RBP18.94■□□□□ 0.62
CAPN1-201ENST00000279247 B4GALNT4Q76KP1 1039 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 C3orf20Q8ND61 904 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 SEC14L1Q92503 715 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 DCLK3Q9C098 648 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 RAB6CQ9H0N0 254 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 ITGA11Q9UKX5 1188 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
CAPN1-201ENST00000279247 PODXLO00592 558 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 MYZAPP0CAP1 466 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 CYP3A5P20815 502 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 SLCO1A2P46721 670 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 CPT1AP50416 773 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 ZNF844Q08AG5 666 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 PDCLQ13371 301 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 TAF5Q15542 800 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 C2CD2Q9Y426 696 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 HSPH1Q92598 858 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 ZNF518BQ9C0D4 1074 aa18.93■□□□□ 0.62
CAPN1-201ENST00000279247 BARX2Q9UMQ3 279 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-201ENST00000279247 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.93■□□□□ 0.62
CAPN1-201ENST00000279247 E5RJQ4 531 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 TRPA1O75762 1119 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 PMS2P54278 862 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ATP11AP98196 1134 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 GOLGA7BQ2TAP0 167 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ZNF618Q5T7W0 954 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-201ENST00000279247 LEKR1Q6ZMV7 388 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 NT5C1AQ9BXI3 368 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 MIS12Q9H081 205 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 DPEP3Q9H4B8 488 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 LRRC19Q9H756 370 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ZNF148Q9UQR1 794 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 C17orf102A2RUQ5 167 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 IFNB1P01574 187 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ZSCAN5DPP0CG00 497 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ETS1P14921 441 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 ATICP31939 592 aa18.92■□□□□ 0.62
CAPN1-201ENST00000279247 CYP1B1Q16678 543 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms