RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 POP1Q99575 1024 aaKnown RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 GDAP2Q9NXN4 497 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
SGCE-201ENST00000265735 TIMM13Q9Y5L4 95 aaPredicted RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 EPN1Q9Y6I3 576 aaPredicted RBP13.54□□□□□ -0.24
SGCE-201ENST00000265735 MUC3AQ02505 3323 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 WDR27A2RRH5 827 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 DLL1O00548 723 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 RFPL2O75678 378 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ZMYND10O75800 440 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 NDUFA10O95299 355 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TNNC2P02585 160 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 ODC1P11926 461 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ATF2P15336 505 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TNNI1P19237 187 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 HNRNPH3P31942 346 aaKnown RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 MTHFRP42898 656 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CACNA2D4Q7Z3S7 1137 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CD320Q9NPF0 282 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 DSEQ9UL01 958 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 LOC730098B7Z3J9 87 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CYB561D2O14569 222 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 AKAP3O75969 853 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 CST3P01034 146 aaPredicted RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 HOXA9P31269 272 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 KRT83P78385 493 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ENPEPQ07075 957 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ATAT1Q5SQI0 421 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TPGS2Q68CL5 300 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 OVOS1Q6IE37 1185 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 USP37Q86T82 979 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 ZNF707Q96C28 371 aaPredicted RBP13.53□□□□□ -0.24
SGCE-201ENST00000265735 RIPOR3Q96MK2 946 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CHP1Q99653 195 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 POMKQ9H5K3 350 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 CEP72Q9P209 647 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 MAFFQ9ULX9 164 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
SGCE-201ENST00000265735 OR6C75A6NL08 312 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 LRRIQ3A6PVS8 624 aaPredicted RBP13.52□□□□□ -0.25
SGCE-201ENST00000265735 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
SGCE-201ENST00000265735 KIF5CO60282 957 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 C8AP07357 584 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 KRT19P08727 400 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 WEE2P0C1S8 567 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 CASQ1P31415 396 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 AP3M2P53677 418 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 GNG11P61952 73 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 DLG4P78352 724 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 ARHGAP29Q52LW3 1261 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 GJD3Q8N144 294 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.25
SGCE-201ENST00000265735 LSM14BQ9BX40 385 aaKnown RBP13.52□□□□□ -0.25
SGCE-201ENST00000265735 STAU1O95793 577 aaKnown RBP13.51□□□□□ -0.25
SGCE-201ENST00000265735 C4BPAP04003 597 aaKnown RBP13.51□□□□□ -0.25
SGCE-201ENST00000265735 POU2F2P09086 479 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
SGCE-201ENST00000265735 GPR17Q13304 367 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 C1orf220Q5T0J3 134 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 WSCD1Q658N2 575 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 RRAGAQ7L523 313 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 TCEAL8Q8IYN2 117 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 ACRBPQ8NEB7 543 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 SYN2Q92777 582 aaPredicted RBP13.51□□□□□ -0.25
SGCE-201ENST00000265735 HPDLQ96IR7 371 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 NHEJ1Q9H9Q4 299 aaPredicted RBP13.51□□□□□ -0.25
SGCE-201ENST00000265735 LZTFL1Q9NQ48 299 aa13.51□□□□□ -0.25
SGCE-201ENST00000265735 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
SGCE-201ENST00000265735 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 EIF3CLB5ME19 914 aaKnown RBP13.5□□□□□ -0.25
SGCE-201ENST00000265735 TNFRSF10AO00220 468 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 EPHB6O15197 1021 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 ARPP19P56211 112 aa13.5□□□□□ -0.25
SGCE-201ENST00000265735 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms