RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PDCL2Q8N4E4 241 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 EFHBQ8N7U6 833 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 NUP58Q9BVL2 599 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
PFDN1-201ENST00000261813 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.39□□□□□ -0.43
PFDN1-201ENST00000261813 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
PFDN1-201ENST00000261813 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 GTPBP10A4D1E9 387 aaKnown RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 H7C4K7 107 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 TRIM66O15016 1216 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 P4HA2O15460 535 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 HUS1O60921 280 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 TBX10O75333 385 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 BMP1P13497 986 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 EPCAMP16422 314 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 OR1D2P34982 312 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 LTBRP36941 435 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 FMO5P49326 533 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 TRIM14Q14142 442 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 SGSM1Q2NKQ1 1148 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 WDR72Q3MJ13 1102 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 CTXN3Q4LDR2 81 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 LLGL2Q6P1M3 1020 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 FBXL13Q8NEE6 735 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 KBTBD7Q8WVZ9 684 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 TAF4BQ92750 862 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 PDLIM2Q96JY6 352 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 TMEM209Q96SK2 561 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 CLDND1Q9NY35 253 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 NXF1Q9UBU9 619 aaKnown RBP12.38□□□□□ -0.43
PFDN1-201ENST00000261813 DSEQ9UL01 958 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 COQ4Q9Y3A0 265 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 BDP1A6H8Y1 2624 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 ITIH6Q6UXX5 1313 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 MYO7AQ13402 2215 aa12.38□□□□□ -0.43
PFDN1-201ENST00000261813 PLXNA3P51805 1871 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 PMM2O15305 246 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 AP5Z1O43299 807 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 TGM5O43548 720 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 HCRTO43612 131 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 TNNC1P63316 161 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 NOP14P78316 857 aaKnown RBP12.37□□□□□ -0.43
PFDN1-201ENST00000261813 MYL7Q01449 175 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 ROR1Q01973 937 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 TFF2Q03403 129 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 RAB33AQ14088 237 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 SPECC1LQ69YQ0 1117 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 LILRA6Q6PI73 481 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 TMEM184AQ6ZMB5 413 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 PPFIBP1Q86W92 1011 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 METTL23Q86XA0 190 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 VSTM4Q8IW00 320 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 ERGIC2Q96RQ1 377 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
PFDN1-201ENST00000261813 SDCBP2Q9H190 292 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 CLEC1BQ9P126 229 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
PFDN1-201ENST00000261813 COG5Q9UP83 839 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 NME7Q9Y5B8 376 aa12.37□□□□□ -0.43
PFDN1-201ENST00000261813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 OR6C75A6NL08 312 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 GABRDO14764 452 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 NCK2O43639 380 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 CLSTN1O94985 981 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 GLUD1P00367 558 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 WARSP23381 471 aaKnown RBP12.36□□□□□ -0.43
PFDN1-201ENST00000261813 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 CDH8P55286 799 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 ARPP19P56211 112 aa12.36□□□□□ -0.43
PFDN1-201ENST00000261813 GSDMDP57764 484 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms