RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PKDCCQ504Y2 493 aa15.02■□□□□ -0
SDF2-201ENST00000247020 PPP1R15BQ5SWA1 713 aa15.02■□□□□ -0
SDF2-201ENST00000247020 DNAJC24Q6P3W2 148 aa15.02■□□□□ -0
SDF2-201ENST00000247020 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02■□□□□ -0
SDF2-201ENST00000247020 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
SDF2-201ENST00000247020 FNIP1Q8TF40 1166 aa15.02■□□□□ -0
SDF2-201ENST00000247020 RUBCNQ92622 972 aa15.02■□□□□ -0
SDF2-201ENST00000247020 C18orf8Q96DM3 657 aa15.02■□□□□ -0
SDF2-201ENST00000247020 ZNF333Q96JL9 665 aa15.02■□□□□ -0
SDF2-201ENST00000247020 NAP1L3Q99457 506 aaPredicted RBP15.02■□□□□ -0
SDF2-201ENST00000247020 PLVAPQ9BX97 442 aa15.02■□□□□ -0
SDF2-201ENST00000247020 TMEM161AQ9NX61 479 aa15.02■□□□□ -0
SDF2-201ENST00000247020 KANSL3Q9P2N6 904 aa15.02■□□□□ -0
SDF2-201ENST00000247020 HESX1Q9UBX0 185 aa15.02■□□□□ -0
SDF2-201ENST00000247020 IP6K2Q9UHH9 426 aa15.02■□□□□ -0
SDF2-201ENST00000247020 CYB561D2O14569 222 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 SPOPO43791 374 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 PROSCO94903 275 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 SSTR3P32745 418 aaPredicted RBP15.02□□□□□ -0.01
SDF2-201ENST00000247020 CLCNKBP51801 687 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 PDCLQ13371 301 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 PPP1R26Q5T8A7 1209 aaPredicted RBP15.02□□□□□ -0.01
SDF2-201ENST00000247020 CCDC70Q6NSX1 233 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 GLB1LQ6UWU2 654 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 SLC39A5Q6ZMH5 540 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 ACOT1Q86TX2 421 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 RTN4RL1Q86UN2 441 aaPredicted RBP15.02□□□□□ -0.01
SDF2-201ENST00000247020 PDCL2Q8N4E4 241 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 SPATA4Q8NEY3 305 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 URGCPQ8TCY9 931 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 LINC01599Q8WXQ3 324 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 ARMC5Q96C12 935 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 PSMB7Q99436 277 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.02□□□□□ -0.01
SDF2-201ENST00000247020 RNF19AQ9NV58 838 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.02□□□□□ -0.01
SDF2-201ENST00000247020 PCDHA3Q9Y5H8 950 aa15.02□□□□□ -0.01
SDF2-201ENST00000247020 V9GYY5 206 aaPredicted RBP15.02□□□□□ -0.01
SDF2-201ENST00000247020 CENPFP49454 3210 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 TMEM191CA6NGB0 347 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 SIGLEC16A6NMB1 481 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 DCDC2CA8MYV0 355 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
SDF2-201ENST00000247020 PEX5P50542 639 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 BCAT1P54687 386 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 C1QTNF8P60827 252 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 ORC1Q13415 861 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 GLE1Q53GS7 698 aaKnown RBP15.01□□□□□ -0.01
SDF2-201ENST00000247020 NIPA2Q8N8Q9 360 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 RNF169Q8NCN4 708 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 SEPT8Q92599 483 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 MCRS1Q96EZ8 462 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 SENP8Q96LD8 212 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 CYTH4Q9UIA0 394 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 TMEM59LQ9UK28 342 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 DSEQ9UL01 958 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 NME7Q9Y5B8 376 aa15.01□□□□□ -0.01
SDF2-201ENST00000247020 TARSL2A2RTX5 802 aaKnown RBP15□□□□□ -0.01
SDF2-201ENST00000247020 CCDC188H7C350 402 aa15□□□□□ -0.01
SDF2-201ENST00000247020 PSTPIP1O43586 416 aa15□□□□□ -0.01
SDF2-201ENST00000247020 CEP104O60308 925 aa15□□□□□ -0.01
SDF2-201ENST00000247020 NBNO60934 754 aa15□□□□□ -0.01
SDF2-201ENST00000247020 CXCL10P02778 98 aa15□□□□□ -0.01
SDF2-201ENST00000247020 CYP11A1P05108 521 aa15□□□□□ -0.01
SDF2-201ENST00000247020 FGFR1P11362 822 aa15□□□□□ -0.01
SDF2-201ENST00000247020 ODC1P11926 461 aa15□□□□□ -0.01
SDF2-201ENST00000247020 MCM3P25205 808 aa15□□□□□ -0.01
SDF2-201ENST00000247020 AFF1P51825 1210 aaKnown RBP15□□□□□ -0.01
SDF2-201ENST00000247020 BST2Q10589 180 aaKnown RBP15□□□□□ -0.01
SDF2-201ENST00000247020 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
SDF2-201ENST00000247020 NAA30Q147X3 362 aaPredicted RBP15□□□□□ -0.01
SDF2-201ENST00000247020 PPP2R5EQ16537 467 aa15□□□□□ -0.01
SDF2-201ENST00000247020 GOLGA7BQ2TAP0 167 aa15□□□□□ -0.01
SDF2-201ENST00000247020 DCUN1D2Q6PH85 259 aa15□□□□□ -0.01
SDF2-201ENST00000247020 XYLT1Q86Y38 959 aa15□□□□□ -0.01
SDF2-201ENST00000247020 ZDHHC17Q8IUH5 632 aa15□□□□□ -0.01
SDF2-201ENST00000247020 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
SDF2-201ENST00000247020 CPXM1Q96SM3 734 aa15□□□□□ -0.01
SDF2-201ENST00000247020 SYNCQ9H7C4 482 aa15□□□□□ -0.01
SDF2-201ENST00000247020 CHORDC1Q9UHD1 332 aaPredicted RBP15□□□□□ -0.01
SDF2-201ENST00000247020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15□□□□□ -0.01
SDF2-201ENST00000247020 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
SDF2-201ENST00000247020 PCNTO95613 3336 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 TMEM110-MUSTN1A8MSY1 372 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 TMEM189-UBE2V1I3L0A0 370 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 M0QZQ0 153 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 HOXA2O43364 376 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 PFKMP08237 780 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 SCNN1AP37088 669 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 RPL34P49207 117 aaKnown RBP14.99□□□□□ -0.01
SDF2-201ENST00000247020 DNA2P51530 1060 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 RWDD2BP57060 319 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 PSMC1P62191 440 aaKnown RBP14.99□□□□□ -0.01
SDF2-201ENST00000247020 DSC1Q08554 894 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 GPNMBQ14956 572 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 ACAP1Q15027 740 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 C2CD6Q53TS8 623 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 SEL1L2Q5TEA6 688 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
SDF2-201ENST00000247020 DSTYKQ6XUX3 929 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms